FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0030102 through 18771 annotations produced 1 hits

(CG12119):

Annotation Number : CG12119
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030102
Gbrowse : chrX:9100152-9104580 (-) // 100.0 //
Probeset : 1630034_at
Accessions : protein= NP_572539;, nucleotide= NM_132311;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay
Interpro : 0016564 // transcription repressor activity // inferred from direct assay
FlyMine data for FBgn0030102.
VDRC has 2 RNAi stocks for FBgn0030102 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.00	Down
Head	37 ± 1	4 of 4	0.60	Down
Eye	36 ± 6	4 of 4	0.58	Down
Thoracicoabdominal ganglion	7 ± 1	0 of 4	0.10	Down
Salivary gland	2 ± 0	0 of 4	0.05	Down
Crop	45 ± 2	4 of 4	0.70	Down
Midgut	55 ± 3	3 of 4	0.90	None
Tubule	4 ± 0	0 of 4	0.10	Down
Hindgut	33 ± 2	4 of 4	0.50	Down
Heart	83 ± 6	4 of 4	1.31	Up
Fat body	11 ± 6	0 of 4	0.18	Down
Ovary	6 ± 2	0 of 4	0.10	Down
Testis	10 ± 1	0 of 4	0.20	Down
Male accessory glands	96 ± 10	4 of 4	1.50	Up
Virgin spermatheca	20 ± 2	0 of 4	0.32	Down
Mated spermatheca	25 ± 3	4 of 4	0.40	Down
Adult carcass	244 ± 18	4 of 4	3.80	Up
Larval CNS	4 ± 2	0 of 4	0.06	Down
Larval Salivary gland	117 ± 21	3 of 4	1.84	None
Larval midgut	4 ± 2	0 of 4	0.07	Down
Larval tubule	2 ± 0	0 of 4	0.00	Down
Larval hindgut	40 ± 3	4 of 4	0.63	Down
Larval fat body	8 ± 3	0 of 4	0.10	Down
Larval trachea	18 ± 9	1 of 4	0.30	Down
Larval carcass	633 ± 17	4 of 4	9.96	Up
S2 cells (growing)	4 ± 2	0 of 4	0.07	Down
Whole fly	63 ± 2	4 of 4

Looking for FBgn0030102. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720