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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030157 through 18771 annotations produced 1 hits



(CG1468):

Annotation Number : CG1468
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030157
Gbrowse : chrX:9772454-9772980 (+) // 53.88 //
Probeset : 1636119_at
Accessions : protein= NP_572585;, nucleotide= NM_132357;
FlyMine data for FBgn0030157.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain155 ± 124 of 4 0.30Down
Head1959 ± 2614 of 4 3.90Up
Eye1016 ± 1504 of 4 2.05Up
Thoracicoabdominal ganglion231 ± 114 of 4 0.50Down
Salivary gland15 ± 40 of 4 0.03Down
Crop52 ± 74 of 4 0.10Down
Midgut3 ± 11 of 4 0.00Down
Tubule50 ± 64 of 4 0.10Down
Hindgut167 ± 84 of 4 0.30Down
Heart2795 ± 2094 of 4 5.63Up
Fat body4060 ± 4994 of 4 8.18Up
Ovary2 ± 00 of 4 0.00Down
Testis3 ± 00 of 4 0.00Down
Male accessory glands3 ± 10 of 4 0.00Down
Virgin spermatheca2679 ± 864 of 4 5.40Up
Mated spermatheca2171 ± 1584 of 4 4.38Up
Adult carcass2058 ± 1984 of 4 4.10Up
Larval CNS25 ± 94 of 4 0.05Down
Larval Salivary gland73 ± 74 of 4 0.15Down
Larval midgut9 ± 14 of 4 0.02Down
Larval tubule14 ± 14 of 4 0.00Down
Larval hindgut72 ± 154 of 4 0.15Down
Larval fat body1777 ± 2214 of 4 3.60Up
Larval trachea43 ± 404 of 4 0.09Down
Larval carcass23 ± 73 of 4 0.05Down
S2 cells (growing)3 ± 00 of 4 0.01Down
Whole fly496 ± 274 of 4

Looking for FBgn0030157. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime