Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030266 through 18771 annotations produced 1 hits



(CG11122):

Annotation Number : CG11122
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030266
Gbrowse : chrX:11006427-11017631 (-) // 100.0 //
Probeset : 1640110_at
Accessions : protein= NP_572685;, nucleotide= NM_132457;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferre
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation
FlyMine data for FBgn0030266.
BDGP gene expression has embryonic in situ data for CG11122: 10 pix of staining in 6 body parts.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain111 ± 34 of 4 3.90Up
Head31 ± 24 of 4 1.10None
Eye39 ± 64 of 4 1.37None
Thoracicoabdominal ganglion74 ± 54 of 4 2.60Up
Salivary gland40 ± 33 of 4 1.40Up
Crop27 ± 14 of 4 0.90None
Midgut15 ± 04 of 4 0.50Down
Tubule26 ± 14 of 4 0.90Down
Hindgut26 ± 14 of 4 0.90None
Heart28 ± 24 of 4 0.98None
Fat body25 ± 44 of 4 0.89None
Ovary40 ± 34 of 4 1.40None
Testis30 ± 14 of 4 1.10None
Male accessory glands29 ± 12 of 4 1.00None
Virgin spermatheca25 ± 33 of 4 0.89None
Mated spermatheca25 ± 04 of 4 0.89None
Adult carcass32 ± 34 of 4 1.10None
Larval CNS91 ± 84 of 4 3.16Up
Larval Salivary gland55 ± 24 of 4 1.94Up
Larval midgut24 ± 24 of 4 0.84None
Larval tubule26 ± 14 of 4 0.90None
Larval hindgut31 ± 34 of 4 1.11None
Larval fat body25 ± 24 of 4 0.90None
Larval trachea45 ± 54 of 4 1.57Up
Larval carcass41 ± 54 of 4 1.43None
S2 cells (growing)36 ± 44 of 4 1.28None
Whole fly28 ± 34 of 4

Looking for FBgn0030266. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime