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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030271 through 18771 annotations produced 1 hits



(CG15202):

Annotation Number : CG15202
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030271
Gbrowse : chrX:11036712-11037412 (+) // 100.0 //
Probeset : 1639774_at
Accessions : protein= NP_572690;, nucleotide= NM_132462;
FlyMine data for FBgn0030271.
VDRC has 3 RNAi stocks for FBgn0030271 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain61 ± 34 of 4 0.50Down
Head473 ± 264 of 4 4.20Up
Eye442 ± 164 of 4 3.89Up
Thoracicoabdominal ganglion132 ± 84 of 4 1.20None
Salivary gland1068 ± 704 of 4 9.41Up
Crop315 ± 164 of 4 2.80Up
Midgut242 ± 314 of 4 2.10Up
Tubule237 ± 104 of 4 2.10Up
Hindgut26 ± 14 of 4 0.20Down
Heart55 ± 44 of 4 0.49Down
Fat body51 ± 84 of 4 0.45Down
Ovary12 ± 02 of 4 0.10Down
Testis6 ± 10 of 4 0.10Down
Male accessory glands214 ± 84 of 4 1.90Up
Virgin spermatheca31 ± 24 of 4 0.27Down
Mated spermatheca26 ± 04 of 4 0.24Down
Adult carcass486 ± 254 of 4 4.30Up
Larval CNS55 ± 74 of 4 0.49Down
Larval Salivary gland42 ± 34 of 4 0.37Down
Larval midgut11 ± 00 of 4 0.10Down
Larval tubule26 ± 34 of 4 0.20Down
Larval hindgut18 ± 13 of 4 0.16Down
Larval fat body12 ± 20 of 4 0.10Down
Larval trachea25 ± 74 of 4 0.22Down
Larval carcass36 ± 14 of 4 0.32Down
S2 cells (growing)20 ± 14 of 4 0.18Down
Whole fly113 ± 84 of 4

Looking for FBgn0030271. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime