Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030272 through 18771 annotations produced 1 hits



(CG15201):

Annotation Number : CG15201
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030272
Gbrowse : chrX:11038152-11038845 (+) // 100.0 //
Probeset : 1624363_at
Accessions : protein= NP_572691;, nucleotide= NM_132463;
FlyMine data for FBgn0030272.
BioGrid reports that CG15201 interacts with CG32369 CG8942 .
VDRC has 5 RNAi stocks for FBgn0030272 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2854 ± 684 of 413.80Up
Head2142 ± 1414 of 410.40Up
Eye3411 ± 614 of 416.49Up
Thoracicoabdominal ganglion3490 ± 1654 of 416.90Up
Salivary gland28 ± 32 of 4 0.14Down
Crop1290 ± 364 of 4 6.20Up
Midgut30 ± 30 of 4 0.10Down
Tubule29 ± 53 of 4 0.10Down
Hindgut858 ± 374 of 4 4.10Up
Heart632 ± 964 of 4 3.06Up
Fat body517 ± 1354 of 4 2.50Up
Ovary3 ± 10 of 4 0.00Down
Testis4 ± 10 of 4 0.00Down
Male accessory glands39 ± 33 of 4 0.20Down
Virgin spermatheca50 ± 44 of 4 0.24Down
Mated spermatheca92 ± 174 of 4 0.45Down
Adult carcass1061 ± 474 of 4 5.10Up
Larval CNS116 ± 234 of 4 0.56Down
Larval Salivary gland7 ± 10 of 4 0.03Down
Larval midgut18 ± 04 of 4 0.09Down
Larval tubule7 ± 11 of 4 0.00Down
Larval hindgut832 ± 1854 of 4 4.02Up
Larval fat body7 ± 30 of 4 0.00Down
Larval trachea156 ± 874 of 4 0.75None
Larval carcass99 ± 124 of 4 0.48Down
S2 cells (growing)7 ± 10 of 4 0.03Down
Whole fly206 ± 164 of 4

Looking for FBgn0030272. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime