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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030305 through 18771 annotations produced 1 hits



(CG1749):

Annotation Number : CG1749
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030305
Gbrowse : chrX:11377539-11379093 (+) // 99.72 //
Probeset : 1633923_at
Accessions : protein= NP_572722;, nucleotide= NM_132494;
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from
FlyMine data for FBgn0030305.
BDGP gene expression has embryonic in situ data for CG1749: 19 pix of staining in 19 body parts.
BioGrid reports that CG1749 interacts with CG2924 .
TRiP has 1 RNAi stocks for FBgn0030305 available for purchase.
VDRC has 2 RNAi stocks for FBgn0030305 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain75 04 of 4 0.40Down
Head106 44 of 4 0.60Down
Eye77 24 of 4 0.42Down
Thoracicoabdominal ganglion74 24 of 4 0.40Down
Salivary gland669 144 of 4 3.62Up
Crop114 34 of 4 0.60Down
Midgut152 54 of 4 0.80Down
Tubule136 304 of 4 0.70None
Hindgut85 14 of 4 0.50Down
Heart105 54 of 4 0.57Down
Fat body158 214 of 4 0.86None
Ovary316 14 of 4 1.70Up
Testis66 34 of 4 0.40Down
Male accessory glands684 164 of 4 3.70Up
Virgin spermatheca298 194 of 4 1.62Up
Mated spermatheca446 434 of 4 2.41Up
Adult carcass110 64 of 4 0.60Down
Larval CNS238 144 of 4 1.29Up
Larval Salivary gland1208 424 of 4 6.54Up
Larval midgut174 24 of 4 0.94None
Larval tubule177 44 of 4 1.00None
Larval hindgut223 124 of 4 1.21Up
Larval fat body328 304 of 4 1.80Up
Larval trachea362 764 of 4 1.96Up
Larval carcass297 204 of 4 1.61Up
S2 cells (growing)268 84 of 4 1.45Up
Whole fly184 64 of 4

Looking for FBgn0030305. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime