Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030319 through 18771 annotations produced 1 hits



(CG2533):

Annotation Number : CG2533
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030319
Gbrowse : chrX:11497273-11498227 (-) // 100.0 //
Probeset : 1630096_at
Accessions : protein= NP_572734;, nucleotide= NM_132506;
FlyMine data for FBgn0030319.
VDRC has 1 RNAi stocks for FBgn0030319 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 ± 10 of 4 0.10Down
Head4 ± 10 of 4 0.00Down
Eye1 ± 00 of 4 0.02Down
Thoracicoabdominal ganglion6 ± 20 of 4 0.10Down
Salivary gland14 ± 60 of 4 0.14Down
Crop55 ± 54 of 4 0.50Down
Midgut9 ± 20 of 4 0.10Down
Tubule6 ± 00 of 4 0.10Down
Hindgut10 ± 00 of 4 0.10Down
Heart4 ± 10 of 4 0.04Down
Fat body11 ± 70 of 4 0.11Down
Ovary8 ± 10 of 4 0.10Down
Testis868 ± 454 of 4 8.10Up
Male accessory glands13 ± 10 of 4 0.10Down
Virgin spermatheca4 ± 10 of 4 0.04Down
Mated spermatheca6 ± 30 of 4 0.06Down
Adult carcass15 ± 30 of 4 0.10Down
Larval CNS6 ± 30 of 4 0.06Down
Larval Salivary gland27 ± 14 of 4 0.26Down
Larval midgut4 ± 20 of 4 0.04Down
Larval tubule5 ± 10 of 4 0.10Down
Larval hindgut8 ± 00 of 4 0.08Down
Larval fat body82 ± 263 of 4 0.80None
Larval trachea6 ± 61 of 4 0.06Down
Larval carcass9 ± 10 of 4 0.09Down
S2 cells (growing)7 ± 00 of 4 0.07Down
Whole fly107 ± 54 of 4

Looking for FBgn0030319. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime