Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030341 through 18771 annotations produced 1 hits



p24-related-1 (p24-1):

Annotation Number : CG1967
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030341
Gbrowse : chrX:11745363-11746548 (-) // 100.0 //
Probeset : 1633304_at
Accessions : protein= NP_572754;, nucleotide= NM_132526;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005215 // transporter activity // inferred from sequence or structural similarity
FlyMine data for FBgn0030341.
BDGP gene expression has embryonic in situ data for CG1967: 8 pix of staining in 6 body parts.
VDRC has 2 RNAi stocks for FBgn0030341 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain82 ± 14 of 4 1.30None
Head64 ± 64 of 4 1.00None
Eye55 ± 34 of 4 0.85None
Thoracicoabdominal ganglion101 ± 54 of 4 1.60Up
Salivary gland1096 ± 724 of 416.89Up
Crop56 ± 24 of 4 0.90None
Midgut84 ± 24 of 4 1.30Up
Tubule127 ± 104 of 4 2.00Up
Hindgut94 ± 54 of 4 1.50Up
Heart76 ± 44 of 4 1.18None
Fat body98 ± 244 of 4 1.52None
Ovary72 ± 14 of 4 1.10None
Testis56 ± 94 of 4 0.90None
Male accessory glands1306 ± 734 of 420.10Up
Virgin spermatheca48 ± 14 of 4 0.75None
Mated spermatheca62 ± 54 of 4 0.96None
Adult carcass201 ± 344 of 4 3.10Up
Larval CNS53 ± 44 of 4 0.82None
Larval Salivary gland1342 ± 264 of 420.70Up
Larval midgut199 ± 54 of 4 3.07Up
Larval tubule52 ± 14 of 4 0.80None
Larval hindgut172 ± 114 of 4 2.65Up
Larval fat body48 ± 73 of 4 0.80None
Larval trachea89 ± 64 of 4 1.37Up
Larval carcass95 ± 104 of 4 1.48Up
S2 cells (growing)294 ± 174 of 4 4.54Up
Whole fly64 ± 64 of 4

Looking for FBgn0030341. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime