Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030347 through 18771 annotations produced 1 hits



(CG15739):

Annotation Number : CG15739
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030347
Gbrowse : chrX:11767475-11769379 (+) // 99.5 //
Probeset : 1640950_at
Accessions : protein= NP_572760;, nucleotide= NM_132532;
Interpro : 0003869 // 4-nitrophenylphosphatase activity // inferred from direct assay /// 0003869 // 4-nitrophenylphosphatase activ
FlyMine data for FBgn0030347.
BDGP gene expression has embryonic in situ data for CG15739: 20 pix of staining in 6 body parts.
BioGrid reports that CG15739 interacts with CG4795 .
VDRC has 3 RNAi stocks for FBgn0030347 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain37 44 of 4 0.30Down
Head375 74 of 4 3.00Up
Eye993 1474 of 4 7.85Up
Thoracicoabdominal ganglion5 00 of 4 0.00Down
Salivary gland14 40 of 4 0.11Down
Crop19 23 of 4 0.20Down
Midgut1066 544 of 4 8.40Up
Tubule126 354 of 4 1.00None
Hindgut375 164 of 4 3.00Up
Heart132 14 of 4 1.05None
Fat body356 714 of 4 2.82Up
Ovary25 14 of 4 0.20Down
Testis76 34 of 4 0.60Down
Male accessory glands10 21 of 4 0.10Down
Virgin spermatheca363 224 of 4 2.87Up
Mated spermatheca387 184 of 4 3.06Up
Adult carcass160 174 of 4 1.30None
Larval CNS13 31 of 4 0.10Down
Larval Salivary gland3 20 of 4 0.03Down
Larval midgut570 184 of 4 4.51Up
Larval tubule37 44 of 4 0.30Down
Larval hindgut240 164 of 4 1.90Up
Larval fat body111 184 of 4 0.90None
Larval trachea29 194 of 4 0.23Down
Larval carcass25 11 of 4 0.20Down
S2 cells (growing)120 44 of 4 0.95None
Whole fly126 104 of 4

Looking for FBgn0030347. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime