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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030350 through 18771 annotations produced 1 hits



Selenoprotein G (SelG):

Annotation Number : CG1844
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030350
Gbrowse : chrX:11781312-11782273 (+) // 99.52 //
Probeset : 1640122_at
Accessions : protein= NP_572763;, nucleotide= NM_132535;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay
FlyMine data for FBgn0030350.
VDRC has 3 RNAi stocks for FBgn0030350 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain464 174 of 4 1.00None
Head909 484 of 4 1.90Up
Eye1120 474 of 4 2.34Up
Thoracicoabdominal ganglion549 214 of 4 1.10None
Salivary gland2416 174 of 4 5.05Up
Crop1344 284 of 4 2.80Up
Midgut579 214 of 4 1.20Up
Tubule511 434 of 4 1.10None
Hindgut1059 254 of 4 2.20Up
Heart1768 344 of 4 3.70Up
Fat body1101 1564 of 4 2.30Up
Ovary248 84 of 4 0.50Down
Testis127 64 of 4 0.30Down
Male accessory glands1123 304 of 4 2.30Up
Virgin spermatheca945 514 of 4 1.98Up
Mated spermatheca1020 344 of 4 2.13Up
Adult carcass1313 514 of 4 2.70Up
Larval CNS395 324 of 4 0.83Down
Larval Salivary gland1088 554 of 4 2.28Up
Larval midgut299 144 of 4 0.63Down
Larval tubule679 104 of 4 1.40Up
Larval hindgut593 94 of 4 1.24Up
Larval fat body659 704 of 4 1.40None
Larval trachea1138 414 of 4 2.38Up
Larval carcass640 134 of 4 1.34Up
S2 cells (growing)1160 314 of 4 2.43Up
Whole fly478 214 of 4

Looking for FBgn0030350. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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