FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0030375 through 18771 annotations produced 1 hits

(CG11356):

Annotation Number : CG11356
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030375
Gbrowse : chrX:11997120-11997762 (-) // 100.0 //
Probeset : 1629519_at
Accessions : protein= NP_572786;, nucleotide= NM_132558;
Interpro : 0005525 // GTP binding // inferred from electronic annotation
FlyMine data for FBgn0030375.
VDRC has 2 RNAi stocks for FBgn0030375 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	1.50	None
Head	5 ± 1	0 of 4	2.90	None
Eye	5 ± 0	0 of 4	2.97	Up
Thoracicoabdominal ganglion	3 ± 1	0 of 4	2.20	None
Salivary gland	12 ± 3	0 of 4	7.37	Up
Crop	6 ± 1	0 of 4	3.50	None
Midgut	2 ± 0	0 of 4	1.10	None
Tubule	8 ± 1	0 of 4	4.90	Up
Hindgut	5 ± 0	0 of 4	3.00	Up
Heart	5 ± 2	0 of 4	3.31	None
Fat body	10 ± 2	0 of 4	6.24	Up
Ovary	1 ± 0	0 of 4	1.00	None
Testis	3 ± 1	0 of 4	2.00	None
Male accessory glands	3 ± 0	0 of 4	2.00	None
Virgin spermatheca	7 ± 2	0 of 4	4.07	None
Mated spermatheca	9 ± 1	0 of 4	5.63	Up
Adult carcass	9 ± 2	0 of 4	5.30	Up
Larval CNS	4 ± 1	0 of 4	2.84	Up
Larval Salivary gland	9 ± 2	0 of 4	5.11	Up
Larval midgut	5 ± 1	0 of 4	2.87	None
Larval tubule	5 ± 1	0 of 4	3.30	Up
Larval hindgut	11 ± 1	0 of 4	6.27	Up
Larval fat body	3 ± 1	0 of 4	1.90	None
Larval trachea	7 ± 1	0 of 4	4.14	Up
Larval carcass	8 ± 2	0 of 4	4.81	None
S2 cells (growing)	6 ± 0	0 of 4	3.60	Up
Whole fly	1 ± 0	0 of 4

Looking for FBgn0030375. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720