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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030385 through 18771 annotations produced 1 hits



CG15732 (Ir11a):

Annotation Number : CG15732
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030385
Gbrowse : chrX:12269628-12271788 (-) // 100.0 //
Probeset : 1636828_at
Accessions : protein= NP_572795;, nucleotide= NM_132567;
Pathway : 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion
FlyMine data for FBgn0030385.
VDRC has 3 RNAi stocks for FBgn0030385 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.30None
Head2 ± 00 of 4 0.80None
Eye4 ± 00 of 4 1.46None
Thoracicoabdominal ganglion2 ± 00 of 4 0.70None
Salivary gland6 ± 30 of 4 2.26None
Crop6 ± 10 of 4 2.00None
Midgut2 ± 10 of 4 0.90None
Tubule1 ± 00 of 4 0.50Down
Hindgut2 ± 10 of 4 0.90None
Heart3 ± 11 of 4 1.29None
Fat body7 ± 30 of 4 2.30None
Ovary2 ± 10 of 4 0.70None
Testis2 ± 00 of 4 0.80None
Male accessory glands6 ± 10 of 4 2.00None
Virgin spermatheca3 ± 10 of 4 1.20None
Mated spermatheca4 ± 11 of 4 1.56None
Adult carcass6 ± 20 of 4 2.20None
Larval CNS1 ± 10 of 4 0.59None
Larval Salivary gland6 ± 10 of 4 1.98None
Larval midgut1 ± 00 of 4 0.32None
Larval tubule4 ± 10 of 4 1.30None
Larval hindgut2 ± 10 of 4 0.73None
Larval fat body6 ± 10 of 4 2.10None
Larval trachea1 ± 20 of 4 0.48None
Larval carcass4 ± 10 of 4 1.54None
S2 cells (growing)1 ± 00 of 4 0.55None
Whole fly3 ± 10 of 4

Looking for FBgn0030385. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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