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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030443 through 18771 annotations produced 1 hits



(CG12715):

Annotation Number : CG12715
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030443
Gbrowse : chrX:12947432-12949325 (-) // 100.0 //
Probeset : 1634027_at
Accessions : protein= NP_572849;, nucleotide= NM_132621;
FlyMine data for FBgn0030443.
VDRC has 3 RNAi stocks for FBgn0030443 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 3.10None
Head1 ± 00 of 4 4.50None
Eye0 ± 00 of 4 2.83None
Thoracicoabdominal ganglion1 ± 00 of 4 3.20None
Salivary gland1 ± 00 of 4 5.67None
Crop2 ± 10 of 4 8.80None
Midgut0 ± 00 of 4 2.40Up
Tubule1 ± 00 of 4 4.80Up
Hindgut1 ± 10 of 4 5.50None
Heart1 ± 00 of 4 5.58None
Fat body2 ± 30 of 4 8.67None
Ovary1 ± 00 of 4 3.70None
Testis0 ± 00 of 4 2.30None
Male accessory glands4 ± 20 of 416.10None
Virgin spermatheca1 ± 00 of 4 6.08None
Mated spermatheca1 ± 00 of 4 3.42None
Adult carcass1 ± 00 of 4 6.00None
Larval CNS0 ± 00 of 4 2.08None
Larval Salivary gland4865 ± 4614 of 416216.75Up
Larval midgut1 ± 00 of 4 4.83None
Larval tubule1 ± 00 of 4 3.30None
Larval hindgut1 ± 00 of 4 6.42None
Larval fat body3 ± 10 of 412.10None
Larval trachea0 ± 00 of 4 2.67None
Larval carcass2 ± 10 of 4 8.92None
S2 cells (growing)0 ± 00 of 4 1.58None
Whole fly0 ± 00 of 4

Looking for FBgn0030443. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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