Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030512 through 18771 annotations produced 1 hits



(CG9940):

Annotation Number : CG9940
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030512
Gbrowse : chrX:13578585-13612316 (-) // 100.0 //
Probeset : 1635826_s_at
Accessions : protein= NP_572913; /// NP_727727;, nucleotide= NM_132685; /// NM_167378;
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003952 // NAD+ synthase (glutamine-hydrolyzin
FlyMine data for FBgn0030512.
VDRC has 3 RNAi stocks for FBgn0030512 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain87 34 of 4 1.60Up
Head68 54 of 4 1.30None
Eye17 04 of 4 0.33Down
Thoracicoabdominal ganglion52 34 of 4 1.00None
Salivary gland44 54 of 4 0.84None
Crop96 44 of 4 1.80Up
Midgut52 74 of 4 1.00None
Tubule97 54 of 4 1.80Up
Hindgut82 14 of 4 1.60Up
Heart54 74 of 4 1.03None
Fat body244 324 of 4 4.60Up
Ovary103 44 of 4 1.90Up
Testis1 00 of 4 0.00Down
Male accessory glands15 33 of 4 0.30Down
Virgin spermatheca84 114 of 4 1.58None
Mated spermatheca80 104 of 4 1.52None
Adult carcass66 94 of 4 1.20None
Larval CNS82 154 of 4 1.56Up
Larval Salivary gland47 74 of 4 0.90None
Larval midgut66 44 of 4 1.24None
Larval tubule96 74 of 4 1.80Up
Larval hindgut98 54 of 4 1.86Up
Larval fat body29 34 of 4 0.60Down
Larval trachea40 94 of 4 0.76None
Larval carcass52 44 of 4 0.99None
S2 cells (growing)57 44 of 4 1.08None
Whole fly53 34 of 4

Looking for FBgn0030512. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime