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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030537 through 18771 annotations produced 1 hits



(CG12480):

Annotation Number : CG12480
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030537
Gbrowse : chrX:14063645-14065588 (+) // 100.0 //
Probeset : 1626827_at
Accessions : protein= NP_572937;, nucleotide= NM_132709;
FlyMine data for FBgn0030537.
BDGP gene expression has embryonic in situ data for CG12480: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0030537 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 1.70None
Head0 ± 00 of 4 1.60None
Eye1 ± 00 of 4 3.09None
Thoracicoabdominal ganglion1 ± 00 of 4 1.80None
Salivary gland2 ± 10 of 4 4.68None
Crop1 ± 00 of 4 2.70None
Midgut3 ± 00 of 4 5.50Up
Tubule1 ± 00 of 4 2.00Up
Hindgut0 ± 00 of 4 1.40None
Heart2 ± 10 of 4 5.05None
Fat body2 ± 10 of 4 4.05None
Ovary0 ± 00 of 4 1.00None
Testis2 ± 00 of 4 3.80None
Male accessory glands2 ± 00 of 4 4.40None
Virgin spermatheca1 ± 00 of 4 3.41None
Mated spermatheca2 ± 00 of 4 3.82None
Adult carcass1 ± 00 of 4 2.80None
Larval CNS0 ± 00 of 4 1.27None
Larval Salivary gland1 ± 00 of 4 3.36Up
Larval midgut1 ± 00 of 4 2.09None
Larval tubule3 ± 00 of 4 5.50None
Larval hindgut15 ± 42 of 428.23None
Larval fat body0 ± 00 of 4 1.50None
Larval trachea1 ± 00 of 4 1.91None
Larval carcass2 ± 00 of 4 5.09Up
S2 cells (growing)2 ± 10 of 4 4.23None
Whole fly0 ± 00 of 4

Looking for FBgn0030537. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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