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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030566 through 18771 annotations produced 1 hits



(CG18313):

Annotation Number : CG18313
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030566
Gbrowse : chrX:14274383-14275331 (+) // 100.0 //
Probeset : 1628745_at
Accessions : protein= NP_572960;, nucleotide= NM_132732;
FlyMine data for FBgn0030566.
BDGP gene expression has embryonic in situ data for CG18313: 8 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0030566 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.30Down
Head1 ± 00 of 4 0.10Down
Eye2 ± 10 of 4 0.17Down
Thoracicoabdominal ganglion0 ± 00 of 4 0.10Down
Salivary gland8 ± 20 of 4 0.61None
Crop1 ± 10 of 4 0.10Down
Midgut1 ± 00 of 4 0.10Down
Tubule3 ± 00 of 4 0.20Down
Hindgut1 ± 00 of 4 0.10Down
Heart2 ± 10 of 4 0.20Down
Fat body7 ± 20 of 4 0.55Down
Ovary0 ± 00 of 4 0.00Down
Testis144 ± 54 of 410.30Up
Male accessory glands0 ± 00 of 4 0.10Down
Virgin spermatheca3 ± 10 of 4 0.28Down
Mated spermatheca0 ± 00 of 4 0.06Down
Adult carcass4 ± 20 of 4 0.30Down
Larval CNS1 ± 21 of 4 0.14Down
Larval Salivary gland4 ± 20 of 4 0.34Down
Larval midgut5 ± 20 of 4 0.38Down
Larval tubule2 ± 00 of 4 0.20Down
Larval hindgut2 ± 00 of 4 0.17Down
Larval fat body38 ± 113 of 4 2.70None
Larval trachea7 ± 31 of 4 0.52Down
Larval carcass2 ± 00 of 4 0.18Down
S2 cells (growing)3 ± 00 of 4 0.24Down
Whole fly14 ± 14 of 4

Looking for FBgn0030566. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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