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FlyAtlas: the Drosophila gene expression atlas

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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030571 through 18771 annotations produced 1 hits



(CG14414):

Annotation Number : CG14414
Flybase ID : FBgn0030571
Gbrowse : chrX:14474640-14476207 (+) // 100.0 //
Probeset : 1627062_s_at
Accessions : protein= NP_572964; /// NP_727783; /// NP_788902;, nucleotide= NM_132736; /// NM_167410; /// NM_176729;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0030571.
BDGP gene expression has embryonic in situ data for CG14414: 11 pix of staining in 8 body parts.
BioGrid reports that CG14414 interacts with CG8665 CG1836 .
VDRC has 3 RNAi stocks for FBgn0030571 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain316 74 of 4 4.70Up
Head108 24 of 4 1.60Up
Eye205 54 of 4 3.08Up
Thoracicoabdominal ganglion174 74 of 4 2.60Up
Salivary gland76 54 of 4 1.15None
Crop71 24 of 4 1.10None
Midgut48 14 of 4 0.70Down
Tubule64 54 of 4 1.00None
Hindgut64 14 of 4 1.00None
Heart50 64 of 4 0.76None
Fat body36 34 of 4 0.55Down
Ovary113 24 of 4 1.70Up
Testis137 54 of 4 2.10Up
Male accessory glands69 54 of 4 1.00None
Virgin spermatheca59 34 of 4 0.88None
Mated spermatheca60 14 of 4 0.90None
Adult carcass50 44 of 4 0.80Down
Larval CNS158 84 of 4 2.37Up
Larval Salivary gland98 44 of 4 1.48Up
Larval midgut37 24 of 4 0.56Down
Larval tubule69 24 of 4 1.00None
Larval hindgut49 14 of 4 0.74Down
Larval fat body63 84 of 4 0.90None
Larval trachea76 74 of 4 1.15None
Larval carcass52 04 of 4 0.79Down
S2 cells (growing)83 24 of 4 1.26Up
Whole fly66 24 of 4

Looking for FBgn0030571. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime