FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0030661 through 18771 annotations produced 1 hits

(CG8105):

Annotation Number : CG8105
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030661
Gbrowse : chrX:15481765-15483399 (+) // 100.0 //
Probeset : 1635830_at
Accessions : protein= NP_573047;, nucleotide= NM_132819;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004035 // alkaline phosphatase activity // inf
FlyMine data for FBgn0030661.
BDGP gene expression has embryonic in situ data for CG8105: 8 pix of staining in 1 body parts.
Homophila reports that CG8105 is a close match (4e-74) to human gene (NP_001623), a gene associated with .
VDRC has 2 RNAi stocks for FBgn0030661 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.10	Down
Head	5 ± 2	0 of 4	0.30	Down
Eye	2 ± 0	0 of 4	0.11	Down
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.20	Down
Salivary gland	6 ± 2	0 of 4	0.34	Down
Crop	4 ± 1	0 of 4	0.20	Down
Midgut	10 ± 2	0 of 4	0.60	None
Tubule	4 ± 0	0 of 4	0.30	Down
Hindgut	4 ± 1	0 of 4	0.20	Down
Heart	0 ± 0	0 of 4	0.04	Down
Fat body	7 ± 4	0 of 4	0.42	Down
Ovary	2 ± 1	0 of 4	0.10	Down
Testis	269 ± 30	4 of 4	14.80	Up
Male accessory glands	10 ± 1	0 of 4	0.60	None
Virgin spermatheca	5 ± 1	0 of 4	0.28	Down
Mated spermatheca	7 ± 1	0 of 4	0.43	Down
Adult carcass	4 ± 1	0 of 4	0.30	Down
Larval CNS	2 ± 1	0 of 4	0.15	Down
Larval Salivary gland	4 ± 1	0 of 4	0.27	Down
Larval midgut	4 ± 1	0 of 4	0.23	Down
Larval tubule	6 ± 1	0 of 4	0.40	Down
Larval hindgut	6 ± 1	0 of 4	0.35	Down
Larval fat body	27 ± 12	1 of 4	1.50	None
Larval trachea	4 ± 3	0 of 4	0.24	Down
Larval carcass	3 ± 0	0 of 4	0.20	Down
S2 cells (growing)	4 ± 0	0 of 4	0.26	Down
Whole fly	18 ± 3	4 of 4

Looking for FBgn0030661. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720