Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030673 through 18771 annotations produced 1 hits



(CG15601):

Annotation Number : CG15601
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030673
Gbrowse : chrX:15605156-15606042 (+) // 100.0 //
Probeset : 1629501_at
Accessions : protein= NP_573058;, nucleotide= NM_132830;
FlyMine data for FBgn0030673.
BioGrid reports that CG15601 interacts with CG8368 .
VDRC has 2 RNAi stocks for FBgn0030673 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain41 ± 24 of 4 1.40Up
Head19 ± 14 of 4 0.70Down
Eye22 ± 14 of 4 0.78Down
Thoracicoabdominal ganglion28 ± 14 of 4 1.00None
Salivary gland22 ± 11 of 4 0.76Down
Crop24 ± 24 of 4 0.80None
Midgut13 ± 20 of 4 0.50Down
Tubule22 ± 03 of 4 0.80Down
Hindgut21 ± 14 of 4 0.70Down
Heart12 ± 14 of 4 0.42Down
Fat body8 ± 32 of 4 0.28Down
Ovary68 ± 34 of 4 2.30Up
Testis59 ± 14 of 4 2.00Up
Male accessory glands14 ± 21 of 4 0.50Down
Virgin spermatheca8 ± 12 of 4 0.30Down
Mated spermatheca8 ± 13 of 4 0.27Down
Adult carcass9 ± 30 of 4 0.30Down
Larval CNS62 ± 24 of 4 2.11Up
Larval Salivary gland36 ± 04 of 4 1.24Up
Larval midgut9 ± 10 of 4 0.33Down
Larval tubule22 ± 24 of 4 0.80Down
Larval hindgut21 ± 24 of 4 0.72Down
Larval fat body20 ± 43 of 4 0.70None
Larval trachea29 ± 44 of 4 1.01None
Larval carcass12 ± 13 of 4 0.44Down
S2 cells (growing)26 ± 14 of 4 0.90None
Whole fly29 ± 24 of 4

Looking for FBgn0030673. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime