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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030675 through 18771 annotations produced 1 hits



(CG8191):

Annotation Number : CG8191
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030675
Gbrowse : chrX:15626214-15627696 (+) // 100.0 //
Probeset : 1631138_at
Accessions : protein= NP_573060;, nucleotide= NM_132832;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0030675.
BDGP gene expression has embryonic in situ data for CG8191: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0030675 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain9 ± 11 of 4 0.30Down
Head29 ± 34 of 4 0.90None
Eye28 ± 14 of 4 0.84None
Thoracicoabdominal ganglion17 ± 14 of 4 0.50Down
Salivary gland55 ± 34 of 4 1.62Up
Crop49 ± 54 of 4 1.40None
Midgut41 ± 44 of 4 1.20None
Tubule102 ± 124 of 4 3.00Up
Hindgut52 ± 54 of 4 1.50Up
Heart33 ± 14 of 4 0.97None
Fat body47 ± 54 of 4 1.37Up
Ovary31 ± 14 of 4 0.90None
Testis14 ± 12 of 4 0.40Down
Male accessory glands34 ± 34 of 4 1.00None
Virgin spermatheca53 ± 24 of 4 1.55Up
Mated spermatheca55 ± 14 of 4 1.60Up
Adult carcass42 ± 34 of 4 1.20None
Larval CNS26 ± 24 of 4 0.76None
Larval Salivary gland48 ± 34 of 4 1.41Up
Larval midgut32 ± 24 of 4 0.94None
Larval tubule41 ± 14 of 4 1.20None
Larval hindgut47 ± 24 of 4 1.38Up
Larval fat body46 ± 54 of 4 1.30None
Larval trachea58 ± 24 of 4 1.70Up
Larval carcass50 ± 24 of 4 1.46Up
S2 cells (growing)42 ± 14 of 4 1.23None
Whole fly34 ± 34 of 4

Looking for FBgn0030675. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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