Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030678 through 18771 annotations produced 1 hits



(CG11679):

Annotation Number : CG11679
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030678
Gbrowse : chrX:15631525-15632942 (-) // 99.72 //
Probeset : 1635654_at
Accessions : protein= NP_573063;, nucleotide= NM_132835;
FlyMine data for FBgn0030678.
BDGP gene expression has embryonic in situ data for CG11679: 8 pix of staining in 1 body parts.
BioGrid reports that CG11679 interacts with CG7757 .
VDRC has 2 RNAi stocks for FBgn0030678 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain29 ± 24 of 4 0.30Down
Head63 ± 24 of 4 0.70Down
Eye42 ± 34 of 4 0.45Down
Thoracicoabdominal ganglion38 ± 34 of 4 0.40Down
Salivary gland77 ± 24 of 4 0.82Down
Crop70 ± 64 of 4 0.80Down
Midgut54 ± 54 of 4 0.60Down
Tubule123 ± 74 of 4 1.30Up
Hindgut75 ± 44 of 4 0.80Down
Heart76 ± 34 of 4 0.82Down
Fat body97 ± 84 of 4 1.05None
Ovary133 ± 14 of 4 1.40Up
Testis32 ± 14 of 4 0.30Down
Male accessory glands81 ± 44 of 4 0.90None
Virgin spermatheca106 ± 44 of 4 1.14None
Mated spermatheca94 ± 44 of 4 1.01None
Adult carcass69 ± 54 of 4 0.70Down
Larval CNS96 ± 74 of 4 1.04None
Larval Salivary gland140 ± 44 of 4 1.50Up
Larval midgut46 ± 44 of 4 0.49Down
Larval tubule135 ± 154 of 4 1.50None
Larval hindgut101 ± 24 of 4 1.08None
Larval fat body62 ± 44 of 4 0.70Down
Larval trachea102 ± 104 of 4 1.10None
Larval carcass77 ± 44 of 4 0.83Down
S2 cells (growing)86 ± 34 of 4 0.93None
Whole fly93 ± 34 of 4

Looking for FBgn0030678. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime