Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030711 through 18771 annotations produced 1 hits



(CG8928):

Annotation Number : CG8928
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030711
Gbrowse : chrX:15839043-15839922 (+) // 100.0 //
Probeset : 1631749_at
Accessions : protein= NP_573092;, nucleotide= NM_132864;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0030711.
VDRC has 2 RNAi stocks for FBgn0030711 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain277 ± 54 of 4 1.10None
Head240 ± 104 of 4 0.90None
Eye274 ± 34 of 4 1.06None
Thoracicoabdominal ganglion292 ± 114 of 4 1.10None
Salivary gland207 ± 164 of 4 0.80Down
Crop267 ± 64 of 4 1.00None
Midgut179 ± 14 of 4 0.70Down
Tubule167 ± 104 of 4 0.60Down
Hindgut193 ± 34 of 4 0.70Down
Heart300 ± 54 of 4 1.16Up
Fat body213 ± 174 of 4 0.82Down
Ovary541 ± 104 of 4 2.10Up
Testis94 ± 34 of 4 0.40Down
Male accessory glands325 ± 134 of 4 1.30Up
Virgin spermatheca247 ± 74 of 4 0.95None
Mated spermatheca283 ± 134 of 4 1.09None
Adult carcass174 ± 64 of 4 0.70Down
Larval CNS372 ± 314 of 4 1.43Up
Larval Salivary gland286 ± 144 of 4 1.10None
Larval midgut130 ± 84 of 4 0.50Down
Larval tubule302 ± 14 of 4 1.20Up
Larval hindgut225 ± 104 of 4 0.87None
Larval fat body381 ± 324 of 4 1.50Up
Larval trachea407 ± 104 of 4 1.57Up
Larval carcass211 ± 114 of 4 0.81Down
S2 cells (growing)271 ± 24 of 4 1.05None
Whole fly259 ± 94 of 4

Looking for FBgn0030711. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime