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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030719 through 18771 annotations produced 1 hits



anon-fast-evolving-3C6 (eIF5):

Annotation Number : CG9177
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030719
Gbrowse : chrX:15881193-15886023 (-) // 100.0 //
Probeset : 1630911_s_at
Accessions : protein= NP_573098; /// NP_727922; /// NP_996477; /// NP_996478; /// NP_996479; /// NP_996480; /// NP_996481;, nucleotide= NM_132870; /// NM_167477; /// NM_206754; /// NM_206755; /// NM_206756; /// NM_206757; /// NM_206758;
Pathway : 0005829 // cytosol // inferred from sequence or structural similarity
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activi
FlyMine data for FBgn0030719.
BDGP gene expression has embryonic in situ data for eIF5: 14 pix of staining in 15 body parts.
TRiP has 1 RNAi stocks for FBgn0030719 available for purchase.
VDRC has 3 RNAi stocks for FBgn0030719 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain950 ± 164 of 4 1.80Up
Head517 ± 194 of 4 1.00None
Eye581 ± 364 of 4 1.10None
Thoracicoabdominal ganglion944 ± 214 of 4 1.80Up
Salivary gland917 ± 574 of 4 1.73Up
Crop656 ± 204 of 4 1.20Up
Midgut399 ± 14 of 4 0.80Down
Tubule895 ± 464 of 4 1.70Up
Hindgut493 ± 54 of 4 0.90Down
Heart643 ± 114 of 4 1.22Up
Fat body653 ± 414 of 4 1.24Up
Ovary851 ± 214 of 4 1.60Up
Testis600 ± 194 of 4 1.10Up
Male accessory glands685 ± 514 of 4 1.30None
Virgin spermatheca1056 ± 244 of 4 2.00Up
Mated spermatheca1069 ± 444 of 4 2.02Up
Adult carcass435 ± 144 of 4 0.80Down
Larval CNS936 ± 454 of 4 1.77Up
Larval Salivary gland1168 ± 514 of 4 2.21Up
Larval midgut481 ± 204 of 4 0.91None
Larval tubule474 ± 154 of 4 0.90Down
Larval hindgut654 ± 284 of 4 1.24Up
Larval fat body339 ± 74 of 4 0.60Down
Larval trachea799 ± 514 of 4 1.51Up
Larval carcass731 ± 564 of 4 1.38Up
S2 cells (growing)500 ± 94 of 4 0.95None
Whole fly529 ± 64 of 4

Looking for FBgn0030719. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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