Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0030721 through 18771 annotations produced 1 hits


(CG12698):

Annotation Number : CG12698
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030721
Gbrowse : chrX:15900179-15902754 (+) // 99.79 //
Probeset : 1622940_at
Accessions : protein= NP_573100;, nucleotide= NM_132872;
FlyMine data for FBgn0030721.
BDGP gene expression has embryonic in situ data for CG12698: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0030721 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10Down
Head2 ± 10 of 4 0.10Down
Eye0 ± 00 of 4 0.03Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland2 ± 00 of 4 0.10Down
Crop1 ± 00 of 4 0.10Down
Midgut1 ± 00 of 4 0.00Down
Tubule2 ± 00 of 4 0.10Down
Hindgut1 ± 00 of 4 0.00Down
Heart2 ± 00 of 4 0.10Down
Fat body3 ± 20 of 4 0.18Down
Ovary2 ± 00 of 4 0.10Down
Testis363 ± 34 of 417.80Up
Male accessory glands5 ± 20 of 4 0.20Down
Virgin spermatheca1 ± 00 of 4 0.06Down
Mated spermatheca2 ± 00 of 4 0.11Down
Adult carcass4 ± 10 of 4 0.20Down
Larval CNS2 ± 20 of 4 0.14Down
Larval Salivary gland1 ± 00 of 4 0.05Down
Larval midgut4 ± 10 of 4 0.24Down
Larval tubule2 ± 00 of 4 0.10Down
Larval hindgut1 ± 00 of 4 0.08Down
Larval fat body46 ± 233 of 4 2.30None
Larval trachea3 ± 20 of 4 0.17Down
Larval carcass1 ± 00 of 4 0.06Down
S2 cells (growing)14 ± 03 of 4 0.73Down
Whole fly20 ± 14 of 4

Looking for FBgn0030721. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime