Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
About & FAQ
Top 50
Original data
Interesting meta-analysis

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0030729 through 18771 annotations produced 1 hits


Annotation Number : CG12507
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030729
Gbrowse : chrX:16159412-16160497 (-) // 100.0 //
Probeset : 1636328_at
Accessions : protein= NP_573108;, nucleotide= NM_132880;
FlyMine data for FBgn0030729.
VDRC has 2 RNAi stocks for FBgn0030729 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 03 of 4 0.70None
Head5 10 of 4 0.80None
Eye4 10 of 4 0.71None
Thoracicoabdominal ganglion9 14 of 4 1.40None
Salivary gland18 42 of 4 2.69None
Crop8 23 of 4 1.20None
Midgut10 03 of 4 1.50Up
Tubule7 02 of 4 1.10None
Hindgut7 13 of 4 1.10None
Heart4 00 of 4 0.68None
Fat body9 23 of 4 1.40None
Ovary4 12 of 4 0.70None
Testis5 11 of 4 0.80None
Male accessory glands9 11 of 4 1.40None
Virgin spermatheca8 13 of 4 1.18None
Mated spermatheca11 14 of 4 1.62Up
Adult carcass17 13 of 4 2.60Up
Larval CNS5 04 of 4 0.81Down
Larval Salivary gland6 11 of 4 0.97None
Larval midgut6 00 of 4 0.93None
Larval tubule7 02 of 4 1.10None
Larval hindgut8 13 of 4 1.18None
Larval fat body8 20 of 4 1.20None
Larval trachea3 21 of 4 0.55None
Larval carcass8 14 of 4 1.26None
S2 cells (growing)5 02 of 4 0.81None
Whole fly6 01 of 4

Looking for FBgn0030729. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime