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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030749 through 18771 annotations produced 1 hits



Annexin B11 (Anxb11):

Annotation Number : CG9968
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030749
Gbrowse : chrX:16311268-16316249 (-) // 100.0 //
Probeset : 1625145_a_at
Accessions : protein= NP_523370; /// NP_727978;, nucleotide= NM_078646; /// NM_167519;
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferr
FlyMine data for FBgn0030749.
BDGP gene expression has embryonic in situ data for Anxb11: 19 pix of staining in 11 body parts.
TRiP has 1 RNAi stocks for FBgn0030749 available for purchase.
VDRC has 4 RNAi stocks for FBgn0030749 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain222 204 of 4 1.00None
Head422 124 of 4 1.80Up
Eye314 144 of 4 1.35Up
Thoracicoabdominal ganglion272 94 of 4 1.20Up
Salivary gland1453 814 of 4 6.23Up
Crop485 114 of 4 2.10Up
Midgut217 84 of 4 0.90None
Tubule368 284 of 4 1.60Up
Hindgut489 114 of 4 2.10Up
Heart242 264 of 4 1.04None
Fat body416 174 of 4 1.78Up
Ovary251 74 of 4 1.10None
Testis96 74 of 4 0.40Down
Male accessory glands1691 404 of 4 7.20Up
Virgin spermatheca397 194 of 4 1.70Up
Mated spermatheca426 224 of 4 1.83Up
Adult carcass295 94 of 4 1.30Up
Larval CNS535 254 of 4 2.29Up
Larval Salivary gland1037 734 of 4 4.44Up
Larval midgut157 44 of 4 0.67Down
Larval tubule651 264 of 4 2.80Up
Larval hindgut795 244 of 4 3.41Up
Larval fat body648 534 of 4 2.80Up
Larval trachea555 554 of 4 2.38Up
Larval carcass655 584 of 4 2.81Up
S2 cells (growing)1099 254 of 4 4.71Up
Whole fly233 124 of 4

Looking for FBgn0030749. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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