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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030759 through 18771 annotations produced 1 hits



(CG13014):

Annotation Number : CG13014
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030759
Gbrowse : chrX:16481943-16482969 (+) // 100.0 //
Probeset : 1631684_at
Accessions : protein= NP_573134;, nucleotide= NM_132906;
FlyMine data for FBgn0030759.
VDRC has 2 RNAi stocks for FBgn0030759 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain25 ± 34 of 4 0.40Down
Head47 ± 64 of 4 0.70Down
Eye36 ± 14 of 4 0.53Down
Thoracicoabdominal ganglion31 ± 34 of 4 0.50Down
Salivary gland60 ± 94 of 4 0.89None
Crop76 ± 34 of 4 1.10None
Midgut76 ± 44 of 4 1.10None
Tubule66 ± 34 of 4 1.00None
Hindgut73 ± 34 of 4 1.10None
Heart70 ± 74 of 4 1.04None
Fat body68 ± 84 of 4 1.00None
Ovary110 ± 14 of 4 1.60Up
Testis13 ± 04 of 4 0.20Down
Male accessory glands152 ± 84 of 4 2.20Up
Virgin spermatheca62 ± 44 of 4 0.93None
Mated spermatheca58 ± 24 of 4 0.86Down
Adult carcass69 ± 44 of 4 1.00None
Larval CNS55 ± 64 of 4 0.81Down
Larval Salivary gland76 ± 74 of 4 1.12None
Larval midgut49 ± 24 of 4 0.72Down
Larval tubule113 ± 24 of 4 1.70Up
Larval hindgut56 ± 24 of 4 0.83Down
Larval fat body84 ± 134 of 4 1.20None
Larval trachea82 ± 54 of 4 1.22Up
Larval carcass57 ± 44 of 4 0.85None
S2 cells (growing)134 ± 54 of 4 1.97Up
Whole fly67 ± 24 of 4

Looking for FBgn0030759. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime