FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0030798 through 18771 annotations produced 1 hits

(CG13003):

Annotation Number : CG13003
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030798
Gbrowse : chrX:16738837-16747269 (-) // 100.0 //
Probeset : 1630570_at
Accessions : protein= NP_001162779; /// NP_573172;, nucleotide= NM_001169308; /// NM_132944;
FlyMine data for FBgn0030798.
BDGP gene expression has embryonic in situ data for CG13003: 12 pix of staining in 3 body parts.
VDRC has 2 RNAi stocks for FBgn0030798 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 0	1 of 4	0.20	Down
Head	60 ± 3	4 of 4	2.00	Up
Eye	151 ± 13	4 of 4	5.15	Up
Thoracicoabdominal ganglion	7 ± 1	2 of 4	0.30	Down
Salivary gland	32 ± 3	3 of 4	1.09	None
Crop	6 ± 1	2 of 4	0.20	Down
Midgut	9 ± 1	4 of 4	0.30	Down
Tubule	5 ± 0	0 of 4	0.20	Down
Hindgut	36 ± 2	4 of 4	1.20	None
Heart	5 ± 0	0 of 4	0.19	Down
Fat body	19 ± 3	4 of 4	0.65	None
Ovary	6 ± 0	1 of 4	0.20	Down
Testis	4 ± 0	0 of 4	0.10	Down
Male accessory glands	14 ± 1	3 of 4	0.50	Down
Virgin spermatheca	18 ± 1	4 of 4	0.63	None
Mated spermatheca	27 ± 3	4 of 4	0.94	None
Adult carcass	95 ± 10	4 of 4	3.20	Up
Larval CNS	6 ± 0	4 of 4	0.23	Down
Larval Salivary gland	16 ± 2	4 of 4	0.56	Down
Larval midgut	13 ± 1	2 of 4	0.45	Down
Larval tubule	5 ± 0	3 of 4	0.20	Down
Larval hindgut	57 ± 4	4 of 4	1.96	Up
Larval fat body	3 ± 1	0 of 4	0.10	Down
Larval trachea	687 ± 88	4 of 4	23.42	Up
Larval carcass	223 ± 19	4 of 4	7.61	Up
S2 cells (growing)	5 ± 1	2 of 4	0.19	Down
Whole fly	29 ± 3	4 of 4

Looking for FBgn0030798. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720