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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030807 through 18771 annotations produced 1 hits



(CG13000):

Annotation Number : CG13000
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030807
Gbrowse : chrX:16842140-16842473 (-) // 100.0 //
Probeset : 1626364_at
Accessions : protein= NP_573182;, nucleotide= NM_132954;
FlyMine data for FBgn0030807.
TRiP has 1 RNAi stocks for FBgn0030807 available for purchase.
VDRC has 2 RNAi stocks for FBgn0030807 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 10 of 4 0.90None
Head8 ± 10 of 4 1.60None
Eye1 ± 00 of 4 0.29Down
Thoracicoabdominal ganglion3 ± 00 of 4 0.60None
Salivary gland31 ± 40 of 4 6.01Up
Crop13 ± 11 of 4 2.50Up
Midgut7 ± 10 of 4 1.40None
Tubule5 ± 10 of 4 0.90None
Hindgut8 ± 10 of 4 1.70None
Heart2 ± 10 of 4 0.42None
Fat body6 ± 30 of 4 1.27None
Ovary7 ± 00 of 4 1.40Up
Testis3 ± 10 of 4 0.60None
Male accessory glands16 ± 20 of 4 3.10Up
Virgin spermatheca11 ± 20 of 4 2.15None
Mated spermatheca6 ± 20 of 4 1.23None
Adult carcass11 ± 10 of 4 2.20Up
Larval CNS5 ± 40 of 4 1.05None
Larval Salivary gland10 ± 20 of 4 2.02None
Larval midgut12 ± 20 of 4 2.43None
Larval tubule7 ± 20 of 4 1.40None
Larval hindgut5 ± 10 of 4 1.04None
Larval fat body9 ± 10 of 4 1.80Up
Larval trachea2 ± 10 of 4 0.45Down
Larval carcass9 ± 10 of 4 1.86Up
S2 cells (growing)2 ± 00 of 4 0.44Down
Whole fly5 ± 00 of 4

Looking for FBgn0030807. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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