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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030851 through 18771 annotations produced 1 hits



/// (CG8326 /// DyakGE15584):

Annotation Number : CG8326
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030851
Gbrowse : chrX:17522196-17523509 (-) // 100.0 //
Probeset : 1639736_at
Accessions : protein= NP_573226;, nucleotide= NM_132998;
FlyMine data for FBgn0030851.
BDGP gene expression has embryonic in situ data for CG8326: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0030851 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain37 ± 14 of 4 0.40Down
Head31 ± 34 of 4 0.40Down
Eye40 ± 14 of 4 0.48Down
Thoracicoabdominal ganglion31 ± 34 of 4 0.40Down
Salivary gland74 ± 34 of 4 0.89None
Crop49 ± 14 of 4 0.60Down
Midgut40 ± 34 of 4 0.50Down
Tubule42 ± 53 of 4 0.50Down
Hindgut33 ± 34 of 4 0.40Down
Heart39 ± 24 of 4 0.47Down
Fat body57 ± 74 of 4 0.68Down
Ovary134 ± 24 of 4 1.60Up
Testis13 ± 01 of 4 0.20Down
Male accessory glands44 ± 33 of 4 0.50Down
Virgin spermatheca42 ± 44 of 4 0.50Down
Mated spermatheca59 ± 44 of 4 0.71Down
Adult carcass44 ± 03 of 4 0.50Down
Larval CNS101 ± 84 of 4 1.21Up
Larval Salivary gland75 ± 24 of 4 0.89None
Larval midgut44 ± 54 of 4 0.52Down
Larval tubule32 ± 04 of 4 0.40Down
Larval hindgut67 ± 14 of 4 0.81Down
Larval fat body25 ± 60 of 4 0.30Down
Larval trachea113 ± 214 of 4 1.35None
Larval carcass79 ± 124 of 4 0.94None
S2 cells (growing)67 ± 14 of 4 0.81Down
Whole fly84 ± 34 of 4

Looking for FBgn0030851. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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