Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030872 through 18771 annotations produced 1 hits



Ucp4A (Ucp4A):

Annotation Number : CG6492
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030872
Gbrowse : chrX:17739020-17741689 (+) // 100.0 //
Probeset : 1622912_at
Accessions : protein= NP_573246;, nucleotide= NM_133018;
Pathway : 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from s
Interpro : 0005488 // binding // inferred from electronic annotation /// 0017077 // oxidative phosphorylation uncoupler activity //
FlyMine data for FBgn0030872.
Homophila reports that CG6492 is a close match (2e-11) to human gene PHC;SLC25A3 (NP_998776), a gene associated with Micochondrial phosphate carrier deficiency, 610773 (3).
VDRC has 2 RNAi stocks for FBgn0030872 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain154 ± 64 of 4 2.20Up
Head57 ± 34 of 4 0.80None
Eye34 ± 24 of 4 0.50Down
Thoracicoabdominal ganglion124 ± 114 of 4 1.80Up
Salivary gland58 ± 44 of 4 0.84None
Crop39 ± 24 of 4 0.60Down
Midgut65 ± 64 of 4 0.90None
Tubule95 ± 74 of 4 1.40Up
Hindgut88 ± 24 of 4 1.30None
Heart42 ± 24 of 4 0.61None
Fat body41 ± 54 of 4 0.60None
Ovary63 ± 44 of 4 0.90None
Testis2 ± 00 of 4 0.00Down
Male accessory glands35 ± 24 of 4 0.50Down
Virgin spermatheca41 ± 14 of 4 0.59None
Mated spermatheca43 ± 34 of 4 0.62None
Adult carcass195 ± 24 of 4 2.80Up
Larval CNS27 ± 13 of 4 0.40Down
Larval Salivary gland49 ± 24 of 4 0.71None
Larval midgut57 ± 44 of 4 0.83None
Larval tubule59 ± 14 of 4 0.80None
Larval hindgut104 ± 14 of 4 1.50Up
Larval fat body32 ± 72 of 4 0.50Down
Larval trachea22 ± 33 of 4 0.32Down
Larval carcass22 ± 31 of 4 0.32Down
S2 cells (growing)38 ± 04 of 4 0.55Down
Whole fly69 ± 94 of 4

Looking for FBgn0030872. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime