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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030895 through 18771 annotations produced 1 hits



(CG7135):

Annotation Number : CG7135
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030895
Gbrowse : chrX:17997713-17999426 (+) // 100.0 //
Probeset : 1626678_at
Accessions : protein= NP_573269;, nucleotide= NM_133041;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0030895.
BioGrid reports that CG7135 interacts with CG7265 .
VDRC has 2 RNAi stocks for FBgn0030895 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain202 ± 54 of 430.20Up
Head331 ± 304 of 449.20Up
Eye904 ± 284 of 4134.44Up
Thoracicoabdominal ganglion55 ± 64 of 4 8.20Up
Salivary gland4 ± 20 of 4 0.67None
Crop3 ± 10 of 4 0.60None
Midgut8 ± 11 of 4 1.20None
Tubule4 ± 00 of 4 0.60Down
Hindgut3 ± 11 of 4 0.60None
Heart2 ± 00 of 4 0.32Down
Fat body5 ± 10 of 4 0.78None
Ovary2 ± 00 of 4 0.40Down
Testis9 ± 12 of 4 1.40None
Male accessory glands2 ± 00 of 4 0.30Down
Virgin spermatheca4 ± 10 of 4 0.73None
Mated spermatheca2 ± 10 of 4 0.43Down
Adult carcass7 ± 20 of 4 1.20None
Larval CNS31 ± 54 of 4 4.68Up
Larval Salivary gland6 ± 20 of 4 0.95None
Larval midgut4 ± 11 of 4 0.68None
Larval tubule2 ± 00 of 4 0.30Down
Larval hindgut2 ± 10 of 4 0.32None
Larval fat body7 ± 30 of 4 1.20None
Larval trachea9 ± 171 of 4 1.38None
Larval carcass2 ± 00 of 4 0.36Down
S2 cells (growing)2 ± 00 of 4 0.32Down
Whole fly6 ± 04 of 4

Looking for FBgn0030895. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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