Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030913 through 18771 annotations produced 1 hits



(CG6123):

Annotation Number : CG6123
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030913
Gbrowse : chrX:18218271-18250121 (-) // 100.0 //
Probeset : 1623878_at
Accessions : protein= NP_573286;, nucleotide= NM_133058;
FlyMine data for FBgn0030913.
BDGP gene expression has embryonic in situ data for CG6123: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0030913 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain114 ± 24 of 448.10Up
Head21 ± 24 of 4 8.90Up
Eye1 ± 00 of 4 0.69None
Thoracicoabdominal ganglion42 ± 34 of 418.00Up
Salivary gland2 ± 10 of 4 1.22None
Crop1 ± 00 of 4 0.80None
Midgut1 ± 00 of 4 0.80None
Tubule2 ± 00 of 4 0.90None
Hindgut1 ± 00 of 4 0.50None
Heart1 ± 00 of 4 0.59None
Fat body5 ± 20 of 4 2.36None
Ovary0 ± 00 of 4 0.30None
Testis1 ± 00 of 4 0.50None
Male accessory glands1 ± 00 of 4 0.70None
Virgin spermatheca3 ± 10 of 4 1.46None
Mated spermatheca2 ± 00 of 4 1.03None
Adult carcass3 ± 10 of 4 1.40None
Larval CNS22 ± 34 of 4 9.49Up
Larval Salivary gland2 ± 00 of 4 1.21None
Larval midgut2 ± 10 of 4 1.19None
Larval tubule2 ± 00 of 4 0.90None
Larval hindgut1 ± 00 of 4 0.59None
Larval fat body4 ± 10 of 4 1.80None
Larval trachea1 ± 10 of 4 0.68None
Larval carcass3 ± 10 of 4 1.32None
S2 cells (growing)0 ± 00 of 4 0.24None
Whole fly2 ± 10 of 4

Looking for FBgn0030913. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime