FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0030930 through 18771 annotations produced 2 hits

polypeptide GalNAc transferase 7 (GalNAc-T2):

Annotation Number : CG6394
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030930
Gbrowse : chrX:18390112-18393902 (-) // 100.0 //
Probeset : 1637736_a_at
Accessions : protein= NP_573301; /// NP_728178;, nucleotide= NM_133073; /// NM_167623;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : "0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0004653 // polypept
FlyMine data for FBgn0030930.
BDGP gene expression has embryonic in situ data for CG6394: 13 pix of staining in 11 body parts.
Homophila reports that CG6394 is a close match (7e-91) to human gene GALNT3;HFTC;HHS (NP_004473), a gene associated with Hyperostosis-hyperphosphatemia syndrome, 610233 (3);Tumoral calcinosis, hyperphosphatemic, familial, 211900 (3).
BioGrid reports that CG6394 interacts with CG9027 CG9083 .
VDRC has 1 RNAi stocks for FBgn0030930 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	61 ± 1	4 of 4	0.50	Down
Head	67 ± 1	4 of 4	0.60	Down
Eye	54 ± 5	4 of 4	0.48	Down
Thoracicoabdominal ganglion	50 ± 3	4 of 4	0.40	Down
Salivary gland	2624 ± 121	4 of 4	23.10	Up
Crop	136 ± 9	4 of 4	1.20	None
Midgut	43 ± 1	1 of 4	0.40	Down
Tubule	74 ± 10	4 of 4	0.70	Down
Hindgut	200 ± 4	4 of 4	1.80	Up
Heart	51 ± 3	4 of 4	0.45	Down
Fat body	70 ± 2	4 of 4	0.62	Down
Ovary	207 ± 9	4 of 4	1.80	Up
Testis	132 ± 3	4 of 4	1.20	None
Male accessory glands	231 ± 4	4 of 4	2.00	Up
Virgin spermatheca	63 ± 2	0 of 4	0.56	Down
Mated spermatheca	73 ± 3	0 of 4	0.65	Down
Adult carcass	73 ± 2	4 of 4	0.70	Down
Larval CNS	59 ± 3	4 of 4	0.52	Down
Larval Salivary gland	2634 ± 139	4 of 4	23.19	Up
Larval midgut	46 ± 3	1 of 4	0.41	Down
Larval tubule	90 ± 3	4 of 4	0.80	None
Larval hindgut	121 ± 4	4 of 4	1.07	None
Larval fat body	104 ± 9	2 of 4	0.90	None
Larval trachea	68 ± 13	4 of 4	0.60	Down
Larval carcass	97 ± 6	4 of 4	0.86	None
S2 cells (growing)	222 ± 7	4 of 4	1.96	Up
Whole fly	113 ± 8	4 of 4

polypeptide GalNAc transferase 7 (GalNAc-T2):

Annotation Number : CG6394
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030930
Gbrowse : chrX:18389208-18393902 (-) // 100.0 //
Probeset : 1629117_at
Accessions : protein= NP_573301; /// NP_728178;, nucleotide= NM_133073; /// NM_167623;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : "0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0004653 // polypept
FlyMine data for FBgn0030930.
BDGP gene expression has embryonic in situ data for CG6394: 13 pix of staining in 11 body parts.
Homophila reports that CG6394 is a close match (7e-91) to human gene GALNT3;HFTC;HHS (NP_004473), a gene associated with Hyperostosis-hyperphosphatemia syndrome, 610233 (3);Tumoral calcinosis, hyperphosphatemic, familial, 211900 (3).
BioGrid reports that CG6394 interacts with CG9027 CG9083 .
VDRC has 1 RNAi stocks for FBgn0030930 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	113 ± 3	4 of 4	1.20	None
Head	82 ± 3	4 of 4	0.90	None
Eye	103 ± 2	4 of 4	1.08	None
Thoracicoabdominal ganglion	93 ± 4	4 of 4	1.00	None
Salivary gland	2238 ± 32	4 of 4	23.33	Up
Crop	116 ± 5	4 of 4	1.20	None
Midgut	42 ± 0	4 of 4	0.40	Down
Tubule	56 ± 2	4 of 4	0.60	Down
Hindgut	180 ± 6	4 of 4	1.90	Up
Heart	75 ± 4	4 of 4	0.79	None
Fat body	109 ± 11	4 of 4	1.14	None
Ovary	183 ± 1	4 of 4	1.90	Up
Testis	34 ± 4	4 of 4	0.40	Down
Male accessory glands	351 ± 10	4 of 4	3.70	Up
Virgin spermatheca	81 ± 6	4 of 4	0.85	None
Mated spermatheca	107 ± 6	4 of 4	1.12	None
Adult carcass	66 ± 6	4 of 4	0.70	Down
Larval CNS	182 ± 19	4 of 4	1.90	Up
Larval Salivary gland	3061 ± 116	4 of 4	31.92	Up
Larval midgut	56 ± 1	4 of 4	0.59	Down
Larval tubule	67 ± 1	4 of 4	0.70	None
Larval hindgut	240 ± 23	4 of 4	2.51	Up
Larval fat body	98 ± 6	4 of 4	1.00	None
Larval trachea	398 ± 39	4 of 4	4.15	Up
Larval carcass	336 ± 11	4 of 4	3.51	Up
S2 cells (growing)	443 ± 14	4 of 4	4.63	Up
Whole fly	95 ± 9	4 of 4

Looking for FBgn0030930. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720