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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030945 through 18771 annotations produced 1 hits



Ing3 (Ing3):

Annotation Number : CG6632
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030945
Gbrowse : chrX:18544750-18547124 (-) // 100.0 //
Probeset : 1635237_at
Accessions : protein= NP_573316;, nucleotide= NM_133088;
Pathway : 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay
Interpro : 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0030945.
Homophila reports that CG6632 is a close match (2e-23) to human gene ING1 (NP_937860), a gene associated with Squamous cell carcinoma, head and neck, 275355 (3).
BioGrid reports that CG6632 interacts with CG9527 .
VDRC has 2 RNAi stocks for FBgn0030945 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain79 ± 24 of 4 1.70Up
Head44 ± 34 of 4 0.90None
Eye48 ± 34 of 4 1.02None
Thoracicoabdominal ganglion65 ± 64 of 4 1.40None
Salivary gland50 ± 22 of 4 1.06None
Crop42 ± 24 of 4 0.90None
Midgut55 ± 44 of 4 1.20None
Tubule28 ± 23 of 4 0.60Down
Hindgut35 ± 24 of 4 0.70Down
Heart23 ± 22 of 4 0.49Down
Fat body30 ± 30 of 4 0.63Down
Ovary77 ± 54 of 4 1.60Up
Testis110 ± 64 of 4 2.30Up
Male accessory glands54 ± 44 of 4 1.10None
Virgin spermatheca24 ± 20 of 4 0.51Down
Mated spermatheca29 ± 20 of 4 0.63Down
Adult carcass41 ± 42 of 4 0.90None
Larval CNS60 ± 94 of 4 1.28None
Larval Salivary gland53 ± 14 of 4 1.12None
Larval midgut66 ± 34 of 4 1.41Up
Larval tubule30 ± 24 of 4 0.60Down
Larval hindgut44 ± 14 of 4 0.94None
Larval fat body23 ± 61 of 4 0.50Down
Larval trachea34 ± 24 of 4 0.73Down
Larval carcass35 ± 24 of 4 0.75Down
S2 cells (growing)94 ± 54 of 4 1.99Up
Whole fly47 ± 34 of 4

Looking for FBgn0030945. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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