Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030949 through 18771 annotations produced 1 hits



Cyp308a1 (Cyp308a1):

Annotation Number : CG6585
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030949
Gbrowse : chrX:18603927-18605578 (+) // 100.0 //
Probeset : 1630374_at
Accessions : protein= NP_573320;, nucleotide= NM_133092;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane //
Interpro : 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fro
FlyMine data for FBgn0030949.
Homophila reports that CG6585 is a close match (2e-11) to human gene CYP4V2;BCD (NP_997235), a gene associated with Bietti crystalline corneoretinal dystrophy, 210370 (3).
VDRC has 1 RNAi stocks for FBgn0030949 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.80None
Head40 ± 44 of 413.30Up
Eye10 ± 30 of 4 3.32None
Thoracicoabdominal ganglion0 ± 00 of 4 0.30None
Salivary gland11 ± 30 of 4 3.69None
Crop3 ± 10 of 4 1.10None
Midgut3 ± 10 of 4 1.20None
Tubule2 ± 00 of 4 0.70Down
Hindgut2 ± 10 of 4 0.70None
Heart2 ± 10 of 4 0.68None
Fat body1 ± 00 of 4 0.32None
Ovary2 ± 11 of 4 0.90None
Testis1 ± 00 of 4 0.50None
Male accessory glands7 ± 41 of 4 2.50None
Virgin spermatheca1 ± 10 of 4 0.63None
Mated spermatheca1 ± 00 of 4 0.49None
Adult carcass9 ± 30 of 4 2.90None
Larval CNS1 ± 10 of 4 0.58None
Larval Salivary gland2 ± 10 of 4 0.94None
Larval midgut3 ± 20 of 4 1.15None
Larval tubule5 ± 10 of 4 1.80None
Larval hindgut4 ± 10 of 4 1.59None
Larval fat body5 ± 20 of 4 1.80None
Larval trachea1 ± 00 of 4 0.45None
Larval carcass2 ± 00 of 4 0.73None
S2 cells (growing)2 ± 00 of 4 0.72None
Whole fly3 ± 10 of 4

Looking for FBgn0030949. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime