FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0030956 through 18771 annotations produced 2 hits

(CG18259):

Annotation Number : CG18259
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030956
Gbrowse : chrUextra:586193-587722 (-) // 64.65 // /// chrX:18675264-18677521 (-) // 100.0 //
Probeset : 1624257_at
Accessions : protein= NP_573324;, nucleotide= NM_133096;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0030956.
BioGrid reports that CG18259 interacts with CG3193 CG33144 CG4095 CG4276 CG5792 CG5939 CG18259 CG18584 CG1962 CG3093 CG3151 CG3189 CG4303 CG5352 CG5692 CG5809 CG6333 CG6819 CG8368 CG9356 CG9426 .
TRiP has 1 RNAi stocks for FBgn0030956 available for purchase.
VDRC has 2 RNAi stocks for FBgn0030956 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	373 ± 11	4 of 4	1.20	Up
Head	228 ± 36	4 of 4	0.70	None
Eye	139 ± 13	4 of 4	0.44	Down
Thoracicoabdominal ganglion	376 ± 12	4 of 4	1.20	Up
Salivary gland	104 ± 7	4 of 4	0.33	Down
Crop	354 ± 30	4 of 4	1.10	None
Midgut	55 ± 1	4 of 4	0.20	Down
Tubule	128 ± 14	4 of 4	0.40	Down
Hindgut	143 ± 6	4 of 4	0.50	Down
Heart	106 ± 14	4 of 4	0.34	Down
Fat body	125 ± 23	4 of 4	0.40	Down
Ovary	794 ± 23	4 of 4	2.50	Up
Testis	235 ± 14	4 of 4	0.70	Down
Male accessory glands	123 ± 4	4 of 4	0.40	Down
Virgin spermatheca	316 ± 31	4 of 4	1.01	None
Mated spermatheca	328 ± 29	4 of 4	1.05	None
Adult carcass	65 ± 4	4 of 4	0.20	Down
Larval CNS	560 ± 63	4 of 4	1.78	Up
Larval Salivary gland	285 ± 20	4 of 4	0.91	None
Larval midgut	83 ± 2	4 of 4	0.27	Down
Larval tubule	94 ± 3	4 of 4	0.30	Down
Larval hindgut	273 ± 10	4 of 4	0.87	Down
Larval fat body	529 ± 37	4 of 4	1.70	Up
Larval trachea	242 ± 68	4 of 4	0.77	None
Larval carcass	260 ± 16	4 of 4	0.83	Down
S2 cells (growing)	297 ± 11	4 of 4	0.95	None
Whole fly	314 ± 10	4 of 4

/// (CG18259 /// CG6961):

Annotation Number : CG6961
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030956 /// FBgn0030959
Gbrowse : chrUextra:586193-587722 (-) // 71.32 // /// chrX:18680174-18682238 (-) // 99.79 // /// chrX:18675323-18677547 (-) // 96.04 //
Probeset : 1628663_s_at
Accessions : protein= NP_573324; /// NP_573325;, nucleotide= NM_133096; /// NM_133097;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0030956 /// FBgn0030959.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	175 ± 1	4 of 4	0.80	None
Head	93 ± 9	4 of 4	0.40	Down
Eye	77 ± 4	4 of 4	0.34	Down
Thoracicoabdominal ganglion	124 ± 2	4 of 4	0.50	Down
Salivary gland	132 ± 10	4 of 4	0.58	Down
Crop	116 ± 6	4 of 4	0.50	Down
Midgut	79 ± 5	4 of 4	0.40	Down
Tubule	134 ± 7	4 of 4	0.60	Down
Hindgut	97 ± 3	4 of 4	0.40	Down
Heart	74 ± 1	4 of 4	0.33	Down
Fat body	57 ± 3	4 of 4	0.25	Down
Ovary	344 ± 9	4 of 4	1.50	Up
Testis	354 ± 5	4 of 4	1.60	Up
Male accessory glands	106 ± 5	4 of 4	0.50	Down
Virgin spermatheca	111 ± 1	4 of 4	0.49	Down
Mated spermatheca	128 ± 3	4 of 4	0.57	Down
Adult carcass	82 ± 10	4 of 4	0.40	Down
Larval CNS	232 ± 20	4 of 4	1.02	None
Larval Salivary gland	138 ± 3	4 of 4	0.61	Down
Larval midgut	59 ± 4	4 of 4	0.26	Down
Larval tubule	113 ± 6	4 of 4	0.50	Down
Larval hindgut	92 ± 4	4 of 4	0.41	Down
Larval fat body	159 ± 6	4 of 4	0.70	Down
Larval trachea	146 ± 7	4 of 4	0.64	Down
Larval carcass	128 ± 8	4 of 4	0.56	Down
S2 cells (growing)	224 ± 5	4 of 4	0.99	None
Whole fly	227 ± 18	4 of 4

Looking for FBgn0030956. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720