FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0030959 through 18771 annotations produced 2 hits

/// (CG18259 /// CG6961):

Annotation Number : CG6961
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030956 /// FBgn0030959
Gbrowse : chrUextra:586193-587722 (-) // 71.32 // /// chrX:18680174-18682238 (-) // 99.79 // /// chrX:18675323-18677547 (-) // 96.04 //
Probeset : 1628663_s_at
Accessions : protein= NP_573324; /// NP_573325;, nucleotide= NM_133096; /// NM_133097;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0030956 /// FBgn0030959.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	175 ± 1	4 of 4	0.80	None
Head	93 ± 9	4 of 4	0.40	Down
Eye	77 ± 4	4 of 4	0.34	Down
Thoracicoabdominal ganglion	124 ± 2	4 of 4	0.50	Down
Salivary gland	132 ± 10	4 of 4	0.58	Down
Crop	116 ± 6	4 of 4	0.50	Down
Midgut	79 ± 5	4 of 4	0.40	Down
Tubule	134 ± 7	4 of 4	0.60	Down
Hindgut	97 ± 3	4 of 4	0.40	Down
Heart	74 ± 1	4 of 4	0.33	Down
Fat body	57 ± 3	4 of 4	0.25	Down
Ovary	344 ± 9	4 of 4	1.50	Up
Testis	354 ± 5	4 of 4	1.60	Up
Male accessory glands	106 ± 5	4 of 4	0.50	Down
Virgin spermatheca	111 ± 1	4 of 4	0.49	Down
Mated spermatheca	128 ± 3	4 of 4	0.57	Down
Adult carcass	82 ± 10	4 of 4	0.40	Down
Larval CNS	232 ± 20	4 of 4	1.02	None
Larval Salivary gland	138 ± 3	4 of 4	0.61	Down
Larval midgut	59 ± 4	4 of 4	0.26	Down
Larval tubule	113 ± 6	4 of 4	0.50	Down
Larval hindgut	92 ± 4	4 of 4	0.41	Down
Larval fat body	159 ± 6	4 of 4	0.70	Down
Larval trachea	146 ± 7	4 of 4	0.64	Down
Larval carcass	128 ± 8	4 of 4	0.56	Down
S2 cells (growing)	224 ± 5	4 of 4	0.99	None
Whole fly	227 ± 18	4 of 4

(CG6961):

Annotation Number : CG6961
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030959
Gbrowse : chrUextra:586193-587722 (-) // 71.32 // /// chrX:18680174-18682238 (-) // 99.79 // /// chrX:18675323-18677547 (-) // 96.04 //
Probeset : 1640361_at
Accessions : protein= NP_573325;, nucleotide= NM_133097;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0030959.
BDGP gene expression has embryonic in situ data for CG6961: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0030959 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	181 ± 20	4 of 4	0.40	Down
Head	140 ± 1	4 of 4	0.30	Down
Eye	115 ± 12	4 of 4	0.26	Down
Thoracicoabdominal ganglion	172 ± 15	4 of 4	0.40	Down
Salivary gland	102 ± 16	4 of 4	0.23	Down
Crop	211 ± 8	4 of 4	0.50	Down
Midgut	100 ± 4	4 of 4	0.20	Down
Tubule	133 ± 4	4 of 4	0.30	Down
Hindgut	101 ± 5	4 of 4	0.20	Down
Heart	140 ± 14	4 of 4	0.31	Down
Fat body	164 ± 13	4 of 4	0.37	Down
Ovary	983 ± 16	4 of 4	2.20	Up
Testis	806 ± 38	4 of 4	1.80	Up
Male accessory glands	144 ± 13	4 of 4	0.30	Down
Virgin spermatheca	331 ± 23	4 of 4	0.73	Down
Mated spermatheca	347 ± 10	4 of 4	0.77	None
Adult carcass	127 ± 10	4 of 4	0.30	Down
Larval CNS	594 ± 43	4 of 4	1.32	Up
Larval Salivary gland	330 ± 21	4 of 4	0.73	Down
Larval midgut	121 ± 10	4 of 4	0.27	Down
Larval tubule	118 ± 10	4 of 4	0.30	Down
Larval hindgut	220 ± 2	4 of 4	0.49	Down
Larval fat body	334 ± 23	4 of 4	0.70	Down
Larval trachea	300 ± 46	4 of 4	0.67	Down
Larval carcass	405 ± 19	4 of 4	0.90	None
S2 cells (growing)	285 ± 8	4 of 4	0.63	Down
Whole fly	450 ± 37	4 of 4

Looking for FBgn0030959. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720