FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0030979 through 18771 annotations produced 1 hits

(CG14190):

Annotation Number : CG14190
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030979
Gbrowse : chrX:18959446-18961453 (+) // 100.0 //
Probeset : 1623178_at
Accessions : protein= NP_573344;, nucleotide= NM_133116;
FlyMine data for FBgn0030979.
VDRC has 3 RNAi stocks for FBgn0030979 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.50	None
Head	6 ± 1	0 of 4	0.70	None
Eye	1 ± 0	0 of 4	0.13	Down
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.40	None
Salivary gland	18 ± 7	1 of 4	2.00	None
Crop	1 ± 0	0 of 4	0.20	Down
Midgut	3 ± 2	0 of 4	0.40	None
Tubule	4 ± 1	0 of 4	0.50	Down
Hindgut	4 ± 1	0 of 4	0.50	None
Heart	2 ± 0	0 of 4	0.29	None
Fat body	13 ± 3	0 of 4	1.49	None
Ovary	4 ± 0	0 of 4	0.50	None
Testis	99 ± 7	4 of 4	11.10	Up
Male accessory glands	12 ± 3	0 of 4	1.40	None
Virgin spermatheca	6 ± 2	0 of 4	0.70	None
Mated spermatheca	11 ± 1	0 of 4	1.31	None
Adult carcass	9 ± 3	0 of 4	1.00	None
Larval CNS	4 ± 1	0 of 4	0.53	None
Larval Salivary gland	4 ± 1	0 of 4	0.45	None
Larval midgut	6 ± 1	0 of 4	0.76	None
Larval tubule	7 ± 2	0 of 4	0.80	None
Larval hindgut	3 ± 1	0 of 4	0.42	None
Larval fat body	21 ± 12	1 of 4	2.40	None
Larval trachea	3 ± 1	0 of 4	0.36	None
Larval carcass	4 ± 2	0 of 4	0.52	None
S2 cells (growing)	5 ± 1	0 of 4	0.59	None
Whole fly	9 ± 2	0 of 4

Looking for FBgn0030979. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720