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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030981 through 18771 annotations produced 1 hits



/// /// (CG14191 /// DmauCG14191 /// DsimCG14191):

Annotation Number : CG14191
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030981
Gbrowse : chrX:18975699-18976606 (+) // 100.0 //
Probeset : 1637963_at
Accessions : protein= NP_573346;, nucleotide= NM_133118;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0030981.
BioGrid reports that CG14191 interacts with CG5907 CG1643 CG2540 CG3613 CG7641 .
VDRC has 5 RNAi stocks for FBgn0030981 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 00 of 4 0.10Down
Head54 ± 174 of 4 0.80None
Eye8 ± 20 of 4 0.12Down
Thoracicoabdominal ganglion3 ± 00 of 4 0.10Down
Salivary gland12 ± 20 of 4 0.18Down
Crop28 ± 34 of 4 0.40Down
Midgut16 ± 21 of 4 0.20Down
Tubule11 ± 01 of 4 0.20Down
Hindgut20 ± 14 of 4 0.30Down
Heart6 ± 10 of 4 0.09Down
Fat body8 ± 31 of 4 0.13Down
Ovary3 ± 10 of 4 0.00Down
Testis3 ± 00 of 4 0.00Down
Male accessory glands7 ± 10 of 4 0.10Down
Virgin spermatheca10 ± 10 of 4 0.15Down
Mated spermatheca8 ± 10 of 4 0.12Down
Adult carcass131 ± 144 of 4 1.90Up
Larval CNS4 ± 00 of 4 0.07Down
Larval Salivary gland11 ± 10 of 4 0.17Down
Larval midgut24 ± 20 of 4 0.37Down
Larval tubule5 ± 00 of 4 0.10Down
Larval hindgut23 ± 24 of 4 0.35Down
Larval fat body4 ± 10 of 4 0.10Down
Larval trachea12 ± 33 of 4 0.18Down
Larval carcass17 ± 53 of 4 0.26Down
S2 cells (growing)7 ± 11 of 4 0.11Down
Whole fly68 ± 94 of 4

Looking for FBgn0030981. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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