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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0030985 through 18771 annotations produced 1 hits



Odorant-binding protein 18a (Obp18a):

Annotation Number : CG15883
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030985
Gbrowse : chrX:19029112-19029901 (-) // 100.0 //
Probeset : 1625531_at
Accessions : protein= NP_573350;, nucleotide= NM_133122;
Interpro : 0005549 // odorant binding // not recorded /// 0005549 // odorant binding // inferred from sequence or structural simila
FlyMine data for FBgn0030985.
BioGrid reports that CG15883 interacts with CG7744 CG8457 .
VDRC has 3 RNAi stocks for FBgn0030985 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain342 ± 154 of 4 2.00Up
Head1164 ± 854 of 4 6.70Up
Eye1624 ± 264 of 4 9.40Up
Thoracicoabdominal ganglion33 ± 34 of 4 0.20Down
Salivary gland34 ± 62 of 4 0.20Down
Crop291 ± 154 of 4 1.70Up
Midgut23 ± 14 of 4 0.10Down
Tubule33 ± 34 of 4 0.20Down
Hindgut1655 ± 724 of 4 9.60Up
Heart4318 ± 2714 of 425.00Up
Fat body1703 ± 1304 of 4 9.86Up
Ovary2 ± 00 of 4 0.00Down
Testis48 ± 24 of 4 0.30Down
Male accessory glands26 ± 22 of 4 0.20Down
Virgin spermatheca1412 ± 634 of 4 8.18Up
Mated spermatheca1586 ± 144 of 4 9.19Up
Adult carcass866 ± 414 of 4 5.00Up
Larval CNS7 ± 00 of 4 0.04Down
Larval Salivary gland17 ± 62 of 4 0.10Down
Larval midgut36 ± 54 of 4 0.21Down
Larval tubule35 ± 24 of 4 0.20Down
Larval hindgut22 ± 24 of 4 0.13Down
Larval fat body10 ± 20 of 4 0.10Down
Larval trachea38 ± 553 of 4 0.22Down
Larval carcass32 ± 24 of 4 0.19Down
S2 cells (growing)44 ± 24 of 4 0.26Down
Whole fly172 ± 64 of 4

Looking for FBgn0030985. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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