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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031018 through 18771 annotations produced 1 hits



(CG12200):

Annotation Number : CG12200
Flybase ID : FBgn0031018
Gbrowse : chrX:19369159-19370083 (+) // 99.57 //
Probeset : 1625292_at
Accessions : protein= NP_573383;, nucleotide= NM_133155;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0031018.
BioGrid reports that CG12200 interacts with CG18619 CG4877 CG16969 CG2072 CG2709 CG30084 CG30404 Dmel CG14425 .
VDRC has 2 RNAi stocks for FBgn0031018 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.00Down
Head2 10 of 4 0.00Down
Eye1 00 of 4 0.01Down
Thoracicoabdominal ganglion3 10 of 4 0.00Down
Salivary gland11 40 of 4 0.09Down
Crop0 00 of 4 0.00Down
Midgut6 10 of 4 0.10Down
Tubule3 00 of 4 0.00Down
Hindgut1 00 of 4 0.00Down
Heart0 00 of 4 0.00Down
Fat body3 10 of 4 0.03Down
Ovary194 134 of 4 1.50None
Testis10 01 of 4 0.10Down
Male accessory glands2 10 of 4 0.00Down
Virgin spermatheca5 00 of 4 0.04Down
Mated spermatheca3 10 of 4 0.02Down
Adult carcass2 00 of 4 0.00Down
Larval CNS1 10 of 4 0.01Down
Larval Salivary gland1 00 of 4 0.01Down
Larval midgut5 10 of 4 0.04Down
Larval tubule5 10 of 4 0.00Down
Larval hindgut3 10 of 4 0.03Down
Larval fat body2 00 of 4 0.00Down
Larval trachea0 00 of 4 0.01Down
Larval carcass4 10 of 4 0.03Down
S2 cells (growing)39 24 of 4 0.31Down
Whole fly127 224 of 4

Looking for FBgn0031018. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime