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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031034 through 18771 annotations produced 1 hits



(CG14205):

Annotation Number : CG14205
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031034
Gbrowse : chrX:19486644-19489581 (+) // 100.0 //
Probeset : 1634239_at
Accessions : protein= NP_608323;, nucleotide= NM_134479;
Interpro : "0008415 // acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // infer
FlyMine data for FBgn0031034.
BDGP gene expression has embryonic in situ data for CG14205: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0031034 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 10 of 4 0.00Down
Head7 20 of 4 0.10Down
Eye2 10 of 4 0.03Down
Thoracicoabdominal ganglion7 10 of 4 0.10Down
Salivary gland8 30 of 4 0.12Down
Crop8 20 of 4 0.10Down
Midgut464 814 of 4 6.70Up
Tubule6 00 of 4 0.10Down
Hindgut7 40 of 4 0.10Down
Heart1 00 of 4 0.02Down
Fat body11 10 of 4 0.16Down
Ovary4 10 of 4 0.10Down
Testis1 00 of 4 0.00Down
Male accessory glands7 20 of 4 0.10Down
Virgin spermatheca4 10 of 4 0.06Down
Mated spermatheca7 20 of 4 0.11Down
Adult carcass5 10 of 4 0.10Down
Larval CNS3 40 of 4 0.06Down
Larval Salivary gland5 10 of 4 0.07Down
Larval midgut1156 1574 of 416.66Up
Larval tubule6 10 of 4 0.10Down
Larval hindgut6 10 of 4 0.09Down
Larval fat body12 50 of 4 0.20Down
Larval trachea1 10 of 4 0.02Down
Larval carcass5 20 of 4 0.08Down
S2 cells (growing)3 10 of 4 0.05Down
Whole fly69 144 of 4

Looking for FBgn0031034. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime