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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031043 through 18771 annotations produced 1 hits



(CG14222):

Annotation Number : CG14222
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031043
Gbrowse : chrX:19515478-19517105 (-) // 100.0 //
Probeset : 1628976_at
Accessions : protein= NP_608331;, nucleotide= NM_134487;
Interpro : 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0008415 // acyltransferase activity /
FlyMine data for FBgn0031043.
BDGP gene expression has embryonic in situ data for CG14222: 17 pix of staining in 14 body parts.
BioGrid reports that CG14222 interacts with CG3510 CG7008 CG8280 CG18816 CG30160 .
TRiP has 1 RNAi stocks for FBgn0031043 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031043 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain280 84 of 4 1.20Up
Head212 84 of 4 0.90None
Eye177 114 of 4 0.74Down
Thoracicoabdominal ganglion215 64 of 4 0.90None
Salivary gland171 124 of 4 0.71Down
Crop247 24 of 4 1.00None
Midgut249 44 of 4 1.00None
Tubule237 104 of 4 1.00None
Hindgut146 74 of 4 0.60Down
Heart126 84 of 4 0.53Down
Fat body224 164 of 4 0.93None
Ovary460 64 of 4 1.90Up
Testis53 34 of 4 0.20Down
Male accessory glands309 114 of 4 1.30Up
Virgin spermatheca179 54 of 4 0.75Down
Mated spermatheca172 24 of 4 0.72Down
Adult carcass175 54 of 4 0.70Down
Larval CNS295 144 of 4 1.23Up
Larval Salivary gland286 24 of 4 1.19Up
Larval midgut168 124 of 4 0.70Down
Larval tubule233 44 of 4 1.00None
Larval hindgut202 144 of 4 0.84None
Larval fat body237 184 of 4 1.00None
Larval trachea285 254 of 4 1.19Up
Larval carcass256 114 of 4 1.07None
S2 cells (growing)333 94 of 4 1.39Up
Whole fly240 104 of 4

Looking for FBgn0031043. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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