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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031058 through 18771 annotations produced 1 hits



(CG14227):

Annotation Number : CG14227
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031058
Gbrowse : chrX:19581895-19582958 (-) // 100.0 //
Probeset : 1629085_at
Accessions : protein= NP_608345;, nucleotide= NM_134501;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0031058.
VDRC has 1 RNAi stocks for FBgn0031058 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.70Down
Head0 00 of 4 0.80None
Eye0 00 of 4 0.73None
Thoracicoabdominal ganglion0 00 of 4 0.60Down
Salivary gland2 00 of 4 1.89None
Crop0 00 of 4 0.60Down
Midgut1 00 of 4 0.90None
Tubule0 00 of 4 0.90Down
Hindgut0 00 of 4 0.60Down
Heart1 00 of 4 0.91None
Fat body1 00 of 4 0.95None
Ovary0 00 of 4 0.70None
Testis1 00 of 4 1.00None
Male accessory glands1 00 of 4 1.80Up
Virgin spermatheca1 00 of 4 1.00None
Mated spermatheca1 00 of 4 1.59None
Adult carcass7 40 of 4 6.90None
Larval CNS0 00 of 4 0.75None
Larval Salivary gland1 00 of 4 0.95None
Larval midgut0 00 of 4 0.77None
Larval tubule0 00 of 4 0.70None
Larval hindgut0 00 of 4 0.73None
Larval fat body1 00 of 4 1.10None
Larval trachea0 00 of 4 0.41Down
Larval carcass0 00 of 4 0.70None
S2 cells (growing)0 00 of 4 0.86None
Whole fly1 00 of 4

Looking for FBgn0031058. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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