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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031065 through 18771 annotations produced 1 hits



(CG14234):

Annotation Number : CG14234
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031065
Gbrowse : chrX:19629606-19634489 (+) // 100.0 //
Probeset : 1632391_at
Accessions : protein= NP_608351;, nucleotide= NM_134507;
FlyMine data for FBgn0031065.
BDGP gene expression has embryonic in situ data for CG14234: 6 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0031065 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain451 84 of 419.20Up
Head65 34 of 4 2.80Up
Eye38 54 of 4 1.62None
Thoracicoabdominal ganglion391 164 of 416.60Up
Salivary gland18 50 of 4 0.81None
Crop2 10 of 4 0.10Down
Midgut0 00 of 4 0.00Down
Tubule1 00 of 4 0.10Down
Hindgut1 00 of 4 0.00Down
Heart2 10 of 4 0.10Down
Fat body14 30 of 4 0.63None
Ovary0 00 of 4 0.00Down
Testis2 10 of 4 0.10Down
Male accessory glands1850 704 of 478.80Up
Virgin spermatheca10 02 of 4 0.46Down
Mated spermatheca9 31 of 4 0.42Down
Adult carcass8 30 of 4 0.40Down
Larval CNS365 454 of 415.53Up
Larval Salivary gland2 10 of 4 0.09Down
Larval midgut0 00 of 4 0.04Down
Larval tubule2 10 of 4 0.10Down
Larval hindgut2 00 of 4 0.09Down
Larval fat body1 00 of 4 0.10Down
Larval trachea2 10 of 4 0.09Down
Larval carcass2 00 of 4 0.11Down
S2 cells (growing)0 00 of 4 0.02Down
Whole fly23 34 of 4

Looking for FBgn0031065. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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