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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0031077 through 18771 annotations produced 1 hits


Annotation Number : CG15618
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031077
Gbrowse : chrX:19753775-19759557 (-) // 100.0 //
Probeset : 1631488_at
Accessions : protein= NP_608361;, nucleotide= NM_134517;
FlyMine data for FBgn0031077.
BioGrid reports that CG15618 interacts with CG6197 CG17358 .
VDRC has 2 RNAi stocks for FBgn0031077 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain74 14 of 4 1.60Up
Head38 24 of 4 0.80None
Eye29 24 of 4 0.65Down
Thoracicoabdominal ganglion74 14 of 4 1.60Up
Salivary gland63 74 of 4 1.39None
Crop44 24 of 4 1.00None
Midgut40 12 of 4 0.90None
Tubule32 14 of 4 0.70Down
Hindgut35 34 of 4 0.80None
Heart24 24 of 4 0.54Down
Fat body39 24 of 4 0.85None
Ovary72 34 of 4 1.60Up
Testis18 12 of 4 0.40Down
Male accessory glands55 14 of 4 1.20Up
Virgin spermatheca44 14 of 4 0.97None
Mated spermatheca61 24 of 4 1.35Up
Adult carcass34 33 of 4 0.80Down
Larval CNS114 64 of 4 2.50Up
Larval Salivary gland99 94 of 4 2.18Up
Larval midgut46 24 of 4 1.02None
Larval tubule33 14 of 4 0.70Down
Larval hindgut52 14 of 4 1.15None
Larval fat body33 44 of 4 0.70None
Larval trachea89 94 of 4 1.96Up
Larval carcass65 44 of 4 1.43Up
S2 cells (growing)191 54 of 4 4.19Up
Whole fly45 24 of 4

Looking for FBgn0031077. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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