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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0031089 through 18771 annotations produced 1 hits



(CG9572):

Annotation Number : CG9572
Flybase ID : FBgn0031089
Gbrowse : chrX:20042163-20049341 (+) // 100.0 //
Probeset : 1636057_at
Accessions : protein= NP_608372;, nucleotide= NM_134528;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031089.
BioGrid reports that CG9572 interacts with CG9653 CG9768 CG9908 .
VDRC has 2 RNAi stocks for FBgn0031089 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain14 20 of 4 0.10Down
Head183 224 of 4 1.40None
Eye28 14 of 4 0.22Down
Thoracicoabdominal ganglion19 20 of 4 0.20Down
Salivary gland81 83 of 4 0.62Down
Crop29 31 of 4 0.20Down
Midgut27 21 of 4 0.20Down
Tubule8 00 of 4 0.10Down
Hindgut34 30 of 4 0.30Down
Heart10 21 of 4 0.08Down
Fat body32 51 of 4 0.25Down
Ovary6 00 of 4 0.00Down
Testis13 13 of 4 0.10Down
Male accessory glands7 20 of 4 0.10Down
Virgin spermatheca23 23 of 4 0.18Down
Mated spermatheca40 44 of 4 0.31Down
Adult carcass891 564 of 4 6.80Up
Larval CNS12 10 of 4 0.10Down
Larval Salivary gland111 64 of 4 0.85None
Larval midgut30 11 of 4 0.24Down
Larval tubule5 10 of 4 0.00Down
Larval hindgut114 44 of 4 0.87None
Larval fat body4 10 of 4 0.00Down
Larval trachea68 84 of 4 0.52Down
Larval carcass475 414 of 4 3.63Up
S2 cells (growing)8 10 of 4 0.07Down
Whole fly131 124 of 4

Looking for FBgn0031089. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime