Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
About & FAQ
Top 50
Original data
Interesting meta-analysis

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0031127 through 18771 annotations produced 1 hits


Annotation Number : CG1835
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031127
Gbrowse : chrX:20539348-20540696 (+) // 99.26 //
Probeset : 1637501_a_at
Accessions : protein= NP_608404; /// NP_728356;, nucleotide= NM_134560; /// NM_167709;
FlyMine data for FBgn0031127.
BDGP gene expression has embryonic in situ data for CG1835: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0031127 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 20 of 4 0.10Down
Head7 30 of 4 0.10Down
Eye4 00 of 4 0.05Down
Thoracicoabdominal ganglion7 20 of 4 0.10Down
Salivary gland18 40 of 4 0.19Down
Crop102 54 of 4 1.00None
Midgut21 31 of 4 0.20Down
Tubule5 10 of 4 0.10Down
Hindgut19 21 of 4 0.20Down
Heart9 01 of 4 0.10Down
Fat body18 42 of 4 0.19Down
Ovary10 10 of 4 0.10Down
Testis1025 134 of 410.50Up
Male accessory glands11 10 of 4 0.10Down
Virgin spermatheca17 41 of 4 0.18Down
Mated spermatheca16 10 of 4 0.17Down
Adult carcass13 40 of 4 0.10Down
Larval CNS8 30 of 4 0.09Down
Larval Salivary gland9 00 of 4 0.10Down
Larval midgut8 00 of 4 0.09Down
Larval tubule9 20 of 4 0.10Down
Larval hindgut4 10 of 4 0.05Down
Larval fat body141 544 of 4 1.50None
Larval trachea12 61 of 4 0.13Down
Larval carcass8 20 of 4 0.09Down
S2 cells (growing)32 14 of 4 0.33Down
Whole fly97 34 of 4

Looking for FBgn0031127. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime