FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0031142 through 18771 annotations produced 3 hits

ryder cup (r-cup):

Annotation Number : CG10998
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031142
Gbrowse : chrX:20895687-20896915 (-) // 100.0 //
Probeset : 1633239_at
Accessions : protein= NP_608419;, nucleotide= NM_134575;
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0031142.
TRiP has 1 RNAi stocks for FBgn0031142 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031142 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	1.10	None
Head	3 ± 0	0 of 4	0.90	None
Eye	5 ± 1	0 of 4	1.15	None
Thoracicoabdominal ganglion	4 ± 0	0 of 4	0.90	None
Salivary gland	3 ± 0	0 of 4	0.74	None
Crop	3 ± 1	0 of 4	0.80	None
Midgut	7 ± 1	0 of 4	1.70	None
Tubule	5 ± 1	0 of 4	1.30	None
Hindgut	3 ± 1	0 of 4	0.90	None
Heart	1 ± 0	0 of 4	0.29	None
Fat body	7 ± 3	0 of 4	1.56	None
Ovary	5 ± 0	0 of 4	1.30	None
Testis	1 ± 0	0 of 4	0.20	None
Male accessory glands	5 ± 1	0 of 4	1.20	None
Virgin spermatheca	10 ± 2	0 of 4	2.22	None
Mated spermatheca	7 ± 2	0 of 4	1.69	None
Adult carcass	2 ± 1	0 of 4	0.50	None
Larval CNS	2 ± 1	0 of 4	0.59	None
Larval Salivary gland	0 ± 0	0 of 4	0.20	None
Larval midgut	10 ± 0	0 of 4	2.23	None
Larval tubule	2 ± 0	0 of 4	0.50	None
Larval hindgut	5 ± 1	0 of 4	1.16	None
Larval fat body	7 ± 2	0 of 4	1.70	None
Larval trachea	2 ± 2	0 of 4	0.52	None
Larval carcass	2 ± 0	0 of 4	0.51	None
S2 cells (growing)	4 ± 1	0 of 4	0.95	None
Whole fly	4 ± 1	0 of 4

ryder cup (r-cup):

Annotation Number : CG10998
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031142
Gbrowse : chrX:20894416-20896915 (-) // 100.0 //
Probeset : 1624192_at
Accessions : protein= NP_608419;, nucleotide= NM_134575;
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0031142.
TRiP has 1 RNAi stocks for FBgn0031142 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031142 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 2	3 of 4	0.20	Down
Head	5 ± 1	1 of 4	0.20	Down
Eye	5 ± 1	0 of 4	0.20	Down
Thoracicoabdominal ganglion	8 ± 0	0 of 4	0.30	Down
Salivary gland	15 ± 2	2 of 4	0.53	Down
Crop	6 ± 1	1 of 4	0.20	Down
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	8 ± 1	1 of 4	0.30	Down
Hindgut	4 ± 1	0 of 4	0.20	Down
Heart	5 ± 1	1 of 4	0.17	Down
Fat body	9 ± 4	0 of 4	0.33	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	351 ± 10	4 of 4	11.90	Up
Male accessory glands	7 ± 2	0 of 4	0.30	Down
Virgin spermatheca	11 ± 1	1 of 4	0.38	Down
Mated spermatheca	14 ± 4	3 of 4	0.47	Down
Adult carcass	12 ± 3	2 of 4	0.40	Down
Larval CNS	5 ± 1	0 of 4	0.17	Down
Larval Salivary gland	8 ± 0	0 of 4	0.29	Down
Larval midgut	6 ± 1	0 of 4	0.20	Down
Larval tubule	5 ± 1	0 of 4	0.20	Down
Larval hindgut	1 ± 0	0 of 4	0.06	Down
Larval fat body	36 ± 19	3 of 4	1.20	None
Larval trachea	5 ± 2	1 of 4	0.19	Down
Larval carcass	4 ± 0	0 of 4	0.16	Down
S2 cells (growing)	5 ± 0	0 of 4	0.18	Down
Whole fly	29 ± 3	4 of 4

ryder cup (r-cup):

Annotation Number : CG10998
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031142
Gbrowse : chrX:20895687-20896915 (-) // 100.0 //
Probeset : 1630108_a_at
Accessions : protein= NP_608419;, nucleotide= NM_134575;
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0031142.
TRiP has 1 RNAi stocks for FBgn0031142 available for purchase.
VDRC has 2 RNAi stocks for FBgn0031142 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 1	0 of 4	0.20	Down
Head	2 ± 1	0 of 4	0.30	Down
Eye	0 ± 0	0 of 4	0.07	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.10	Down
Salivary gland	5 ± 2	0 of 4	0.65	None
Crop	1 ± 0	0 of 4	0.20	Down
Midgut	1 ± 0	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.40	Down
Hindgut	2 ± 1	0 of 4	0.30	Down
Heart	3 ± 1	0 of 4	0.46	Down
Fat body	2 ± 1	0 of 4	0.31	Down
Ovary	2 ± 0	0 of 4	0.30	Down
Testis	88 ± 5	4 of 4	10.90	Up
Male accessory glands	5 ± 2	0 of 4	0.70	None
Virgin spermatheca	1 ± 0	0 of 4	0.15	Down
Mated spermatheca	2 ± 0	0 of 4	0.26	Down
Adult carcass	6 ± 2	0 of 4	0.80	None
Larval CNS	1 ± 0	0 of 4	0.13	Down
Larval Salivary gland	3 ± 1	0 of 4	0.37	Down
Larval midgut	0 ± 0	0 of 4	0.08	Down
Larval tubule	2 ± 1	0 of 4	0.30	Down
Larval hindgut	1 ± 0	0 of 4	0.18	Down
Larval fat body	16 ± 4	3 of 4	2.00	None
Larval trachea	1 ± 1	0 of 4	0.23	Down
Larval carcass	0 ± 0	0 of 4	0.08	Down
S2 cells (growing)	2 ± 0	0 of 4	0.30	Down
Whole fly	8 ± 1	2 of 4

Looking for FBgn0031142. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720